PROTEIN: Rep_198_c_29_14
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Protein File & Metadata
Source:
Rep_198_c_29_14.pdb
Genome ID:
Protein ID:
Rep_198_c_29_14
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Protein Sequence
MPSVRFSHDL MHIERRYWLF GATIVLFQLA GYNAMTLSLL AFSLILLFSA ECFFHNVQAL 60 KWFLSFCIGT LFIGLIKLFF NDASMKSLMM WGQFYLLCFA LLGLKDRKQA LQVLKIVVYL 120 IFIGDLISNL LLMLGFDLPW SSLPPKRIGE FFPRFTGIKN NTLYSGSISF LALCFTLHER 180 QLPKYLHRLL LAMMVFNLVL ASSFRYYIAL FSVVILIKFQ LYSRQKLLKI GYVGTIILVV 240 LATWLTRTIS LSNSLRWQLW NNTLDRITEN PLSGIGFMFQ ELSEHSMVSY HNLAMSGVTE 300 STILLIMLCF GLPMTLLFLA VIAQTLSRMR FSSTYSVTLG LFLSLSLDLF WGGSWDNILS 360 LSLFLLSLYG INHEGYFLQR AERYLSKEQR EPQLSADDSP KLNE 404
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9HUG6-F1-model_v4 | 12 | 388 | 19 | 398 | 0.6683 |
0.7293 |
| AF-A0A0H3H4H7-F1-model_v4 | 13 | 375 | 11 | 385 | 0.6558 |
0.7313 |
| AF-Q9I1M9-F1-model_v4 | 12 | 400 | 43 | 476 | 0.6405 |
0.7346 |
| AF-A0A5P3FVF2-F1-model_v4 | 13 | 374 | 13 | 383 | 0.6354 |
0.7414 |
| AF-X8F0V5-F1-model_v4 | 14 | 379 | 42 | 458 | 0.6209 |
0.7527 |
| AF-Q5FA54-F1-model_v4 | 9 | 377 | 13 | 429 | 0.5709 |
0.751 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A2S058-F1-model_v4 | GH39 | 11 | 384 | 6 | 406 | 0.6876 |
0.7768 |
| AF-H8L3P3-F1-model_v4 | GT2 | 3 | 396 | 5 | 613 | 0.5537 |
0.7407 |
| UII34295.1 | GT4 | 13 | 404 | 16 | 754 | 0.5509 |
0.7518 |
| AF-A0A517MXC4-F1-model_v4 | GT26 | 13 | 399 | 22 | 466 | 0.5416 |
0.7368 |
| AF-A0A7Z3BHU7-F1-model_v4 | GH39 | 12 | 378 | 19 | 417 | 0.5375 |
0.804 |
| AF-A0A6G6J4Y8-F1-model_v4 | GH39 | 12 | 378 | 19 | 417 | 0.5361 |
0.8025 |
| AF-M4X4V7-F1-model_v4 | GH39 | 12 | 378 | 19 | 417 | 0.5355 |
0.8019 |
| AF-D5MJ04-F1-model_v4 | GT9 | 13 | 399 | 26 | 478 | 0.5289 |
0.7269 |
| AF-A0A0C5WHY3-F1-model_v4 | GT4 | 12 | 404 | 4 | 625 | 0.5258 |
0.7088 |
| AF-A0A5B7R2V6-F1-model_v4 | GH5_39 | 13 | 370 | 383 | 782 | 0.465 |
0.6922 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A2S058 | GH39 | 11 | 384 | 6 | 406 | 0.6876 |
0.7768 |
| A0A7D6J0J0 | GT4 | 13 | 378 | 22 | 421 | 0.686 |
0.7888 |
| H8L3P3 | GT2 | 3 | 396 | 5 | 613 | 0.5537 |
0.7407 |
| UII34295.1 | GT4 | 13 | 404 | 16 | 754 | 0.5509 |
0.7518 |
| A0A517MXC4 | GT26 | 13 | 399 | 22 | 466 | 0.5416 |
0.7368 |
| M4X4V7 | GH39 | 12 | 378 | 19 | 417 | 0.5355 |
0.8019 |
| D5MJ04 | GT9 | 13 | 399 | 26 | 478 | 0.5289 |
0.7269 |
| A0A0C5WHY3 | GT4 | 12 | 404 | 4 | 625 | 0.5258 |
0.7088 |
| USX27957.1 | GT9 | 9 | 394 | 11 | 490 | 0.4985 |
0.6816 |
| D9S8K7 | GT4 | 12 | 389 | 13 | 586 | 0.4843 |
0.6841 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q02729-F1-model_v4 | 9 | 385 | 11 | 407 | 0.672 |
0.7623 |
| AF-Q9HUG6-F1-model_v4 | 12 | 388 | 19 | 398 | 0.6683 |
0.7293 |
| AF-Q6F7F9-F1-model_v4 | 11 | 381 | 7 | 407 | 0.6176 |
0.7784 |
| AF-Q6FFS6-F1-model_v4 | 10 | 380 | 18 | 426 | 0.6012 |
0.7693 |