PROTEIN: Rep_1939_c_1_1852
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
Rep_1939_c_1_1852.pdb
Genome ID:
Protein ID:
Rep_1939_c_1_1852
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MIHTRIRFLI LIVLLPILAF TLTACYTITL KEKRVDGLGS AISIKLPGNL QSFDLPIPVS 60 PAAKPYYEGS RLYGENDAGL YIAVYTNRID VRKMADDLHL KQEDAIRQNL AQTVDTTTQA 120 VLAKIGAENV STTQEERTLD GKPAVVRSAT FNYEKRSMRA RLLGFSDGPV TWIVVVACDE 180 NKDDKIKLAD EIIDSVSLQP 200
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GUE1-F1-model_v4 | 8 | 199 | 5 | 185 | 0.601 |
0.6634 |
| AF-Q32AR2-F1-model_v4 | 10 | 199 | 31 | 203 | 0.5822 |
0.6961 |
| AF-P82538-F1-model_v4 | 28 | 200 | 79 | 230 | 0.5609 |
0.7926 |
| AF-K7MVB4-F1-model_v4 | 28 | 200 | 84 | 235 | 0.5562 |
0.7943 |
| AF-I1JJ05-F1-model_v4 | 3 | 199 | 22 | 258 | 0.5496 |
0.6449 |
| AF-B6ST36-F1-model_v4 | 28 | 200 | 89 | 240 | 0.5477 |
0.7902 |
| AF-I1JDS1-F1-model_v4 | 10 | 200 | 39 | 247 | 0.5457 |
0.6472 |
| AF-I1NJ53-F1-model_v4 | 27 | 200 | 78 | 230 | 0.5423 |
0.7618 |
| AF-Q8GTK4-F1-model_v4 | 27 | 199 | 83 | 254 | 0.5409 |
0.7123 |
| AF-A0A1D6F9C2-F1-model_v4 | 27 | 199 | 87 | 258 | 0.5365 |
0.7109 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T778-F1-model_v4 | GT4 | 27 | 199 | 36 | 194 | 0.587 |
0.7431 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T778 | GT4 | 27 | 199 | 36 | 194 | 0.587 |
0.7431 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2vu4-assembly1.cif.gz_A | 28 | 199 | 1 | 148 | 0.6657 |
0.7903 |
| 1v2b-assembly2.cif.gz_B | 28 | 199 | 1 | 151 | 0.6619 |
0.7813 |
| 2xb3-assembly1.cif.gz_A | 28 | 199 | 1 | 155 | 0.6608 |
0.7737 |
| 1v2b-assembly1.cif.gz_A | 28 | 199 | 1 | 148 | 0.654 |
0.7784 |
| 4rth-assembly1.cif.gz_A | 28 | 199 | 2 | 167 | 0.643 |
0.7296 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P0AEE2-F1-model_v4 | 14 | 200 | 11 | 185 | 0.5992 |
0.6802 |
| AF-Q96334-F1-model_v4 | 27 | 199 | 46 | 217 | 0.5768 |
0.7118 |
| AF-P82538-F1-model_v4 | 28 | 200 | 79 | 230 | 0.5609 |
0.7926 |
| AF-O49080-F1-model_v4 | 1 | 199 | 24 | 264 | 0.5411 |
0.6349 |
| AF-P29795-F1-model_v4 | 27 | 199 | 87 | 258 | 0.5399 |
0.7154 |
| AF-P16059-F1-model_v4 | 27 | 199 | 88 | 259 | 0.5378 |
0.7137 |
| AF-P93566-F1-model_v4 | 27 | 199 | 89 | 260 | 0.5376 |
0.7146 |
| AF-Q00434-F1-model_v4 | 27 | 199 | 88 | 258 | 0.5355 |
0.7135 |
| AF-Q9SLQ8-F1-model_v4 | 27 | 199 | 92 | 263 | 0.5343 |
0.7134 |
| AF-Q42029-F1-model_v4 | 27 | 199 | 92 | 263 | 0.5341 |
0.7131 |