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PROTEIN: Rep_185_c_1_1007

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Protein File & Metadata
Download PDB File
Source:
Rep_185_c_1_1007.pdb
Genome ID:
Rep_185
Protein ID:
Rep_185_c_1_1007

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Detailed structural information will appear here after analysis...

Protein Sequence 
MFFSHIKYLF   STKDKRNMML   RKNILFSAIL   KVIGLCSSLL   IVPITLEYLS   SEVYGIWLTM 60
SSVLYWFAFF   DVGLGNGMRN   YLTGAISVKD   YNAAKSIIST   TFILLFIIAL   LLGTVVSVLL 120
YVLDLNEVFN   TSLVSGGLLR   ETMLVASAFT   LLMFVVKNIG   IIFVAMQKYA   VNDLLLVSGN 180
VLALLVVLLL   TKYTADGNLF   LVVLAFTATP   VVVFFIAAAV   LFFRNPMLRP   SFKCINYKLA 240
YKVVGKGLGF   FLIQITSCIV   IFGSSNLFIA   QFCGQEKVTV   YNIAYRFFNL   LAIAYTIIIS 300
PLWNAYTDAY   VKGDMVWIRN   TFNRALKIWL   FTVVVGFFML   VVCGSFYKIW   IGSAVDVPLS 360
VSICVLLFVC   SFNLNNCVTY   LLNGLNKIRI   QIITSLIFTL   LFLMVMSIGG   NKLKIESISI 420
CMAISYFAMS   LIHLYQCRKL   IAKKAEGIWN   K 451
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P26400-F1-model_v4 12 444 4 430 0.8405 0.8843
AF-P37746-F1-model_v4 12 444 1 414 0.8392 0.8932
AF-P0AAA7-F1-model_v4 16 445 1 416 0.8363 0.8879
AF-Q9L6Q9-F1-model_v4 18 446 1 416 0.8334 0.8852
AF-A0A0H3GLL0-F1-model_v4 16 446 1 416 0.8332 0.8851
AF-Q329X0-F1-model_v4 16 445 1 416 0.8291 0.8813
AF-P71399-F1-model_v4 17 450 1 401 0.8068 0.8721
AF-Q32EG2-F1-model_v4 5 439 1 396 0.7997 0.8697
AF-Q2G262-F1-model_v4 15 442 1 406 0.7904 0.9108
AF-P9WLW1-F1-model_v4 13 443 23 432 0.7849 0.8617
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A160T089-F1-model_v4 GT4 14 444 1 437 0.7961 0.8988
AF-A0A160T2N7-F1-model_v4 GT28 11 444 34 468 0.7479 0.8615
QNU38870.1 GT4 17 443 1 408 0.6954 0.8846
AF-A0A1P8M2V1-F1-model_v4 GT2 3 446 176 687 0.6711 0.838
QJC17489.1 GT2 7 445 332 772 0.6702 0.9026
AF-A0A345VG16-F1-model_v4 GT2 9 445 218 680 0.6701 0.8445
AF-A0A5B8KBR4-F1-model_v4 GT2 3 446 171 682 0.6699 0.8343
B1FZW0 GT2 13 448 1 598 0.6632 0.8469
AF-A0A248VQW5-F1-model_v4 GT2 13 449 1 602 0.6594 0.8404
AF-F9ZKY1-F1-model_v4 GT2 7 451 28 842 0.6434 0.8572
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A160T089 GT4 14 444 1 437 0.7961 0.8988
A0A160T2N7 GT28 11 444 34 468 0.7479 0.8615
QNU38870.1 GT4 17 443 1 408 0.6954 0.8846
QJC17489.1 GT2 7 445 332 772 0.6702 0.9026
B1FZW0 GT2 13 448 1 598 0.6632 0.8469
F9ZKY1 GT2 7 451 28 842 0.6434 0.8572
A0A0J6W0G8 GH16_3 13 444 16 426 0.6433 0.8624
E4NKE4 GT2 8 450 11 679 0.6423 0.8035
A0A9E6Y097 GT4 1 445 177 832 0.6394 0.8465
A0A517Z2I8 GT2 11 443 3 422 0.6366 0.9039
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6fhz-assembly1.cif.gz_A 1 446 1 437 0.7907 0.8276
7waw-assembly1.cif.gz_A 24 444 1 428 0.7766 0.8828
6nc6-assembly2.cif.gz_B 24 439 1 405 0.7333 0.8388
5c6o-assembly1.cif.gz_A 14 443 10 441 0.7299 0.7843
5y50-assembly1.cif.gz_A 1 443 1 437 0.7145 0.7616
6hfb-assembly3.cif.gz_C 14 450 3 450 0.7099 0.7588
4mlb-assembly1.cif.gz_C 14 450 3 451 0.7084 0.7586
6gwh-assembly1.cif.gz_A 14 450 2 439 0.7045 0.7458
3wbn-assembly1.cif.gz_A 16 451 10 450 0.7016 0.751
5xjj-assembly1.cif.gz_A 1 443 1 438 0.7009 0.7465
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q05347-F1-model_v4 13 447 1 432 0.8534 0.8934
AF-Q99191-F1-model_v4 12 445 5 432 0.8489 0.8923
AF-P26400-F1-model_v4 12 444 4 430 0.8405 0.8843
AF-P37746-F1-model_v4 12 444 1 414 0.8392 0.8932
AF-P0AAA7-F1-model_v4 16 445 1 416 0.8363 0.8879
AF-P0AAA8-F1-model_v4 16 445 1 416 0.8314 0.8834
AF-Q45411-F1-model_v4 12 446 7 430 0.827 0.8819
AF-P37781-F1-model_v4 17 445 1 417 0.8153 0.8691
AF-P71399-F1-model_v4 17 450 1 401 0.8068 0.8721
AF-P71060-F1-model_v4 18 445 1 428 0.8047 0.9066
Download Full SwissProt Results