PROTEIN: Rep_177_c_0_1340
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Protein File & Metadata
Source:
Rep_177_c_0_1340.pdb
Genome ID:
Protein ID:
Rep_177_c_0_1340
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Protein Sequence
MKKGQVLLLS VMLSLAGNAN AQDSGELIDL LPEGVTANIN PERKWDKQKN LVVAGSPEKG 60 YKAFFAATDS EHGEELWVTD GTKEGTHMVA DLIPGSISSE PCYISRFNDK VLFSAYTDEY 120 GRETYISDGT AEGTILLADT YILGDGDPKA FIQMDEKHAV FAATDDESAE YDLVRGAQQW 180 LWITDGTPEG THRLYECDMR WPGQDNTTLH TAYVRVGRRV FFKADDKDGT TGEELWVTDG 240 TPEGTYCVMD INWERYGEGQ PGYEEGYTRN SGLDNLENYN NERVFFQAWT PDYGSEPWTS 300 DGLAAEGLNG PGESGTEHTY MIYDAHAGKN DGGIGFSSST FGTGWEVYKD RIWFRAWSAE 360 TGYEFGGTNM QKGDYHVYDI FTREPSRDNN SYSDPGCIFD GVYMFCASEG FDAALGQTGG 420 ELHYFDGEKV VLQYDFCPGT KCDWVKEQTV AGGSMYWWNE SNDVAAGFGT GLYRLDGKDE 480 VPVVCTHIVP TGDFVHSLRN LGGTICFASD ATKKVYVYKY TKPGWDGKSD MGYLEPEYRT 540 PAEIAAGTDA IKDIEAEDGS TVDVYTLDGV LLRAKADAAK ATEGLAKGVY IVGKKKVIVR 600
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q12884-F1-model_v4 | 40 | 511 | 55 | 555 | 0.4574 |
0.6403 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7M2WYV3 | CBM96 | 28 | 600 | 78 | 1049 | 0.4896 |
0.6524 |
| UOQ69144.1 | CBM57 | 8 | 523 | 48 | 524 | 0.4489 |
0.6183 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7M2WYV3 | CBM96 | 28 | 600 | 78 | 1049 | 0.4896 |
0.6524 |
| UOQ69144.1 | CBM57 | 8 | 523 | 48 | 524 | 0.4489 |
0.6183 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6eho-assembly1.cif.gz_A | 15 | 543 | 5 | 631 | 0.5366 |
0.6355 |
| 5nmt-assembly1.cif.gz_B | 17 | 546 | 4 | 574 | 0.5342 |
0.6377 |
| 5znn-assembly1.cif.gz_B | 17 | 542 | 3 | 628 | 0.5337 |
0.6382 |
| 5znn-assembly1.cif.gz_A | 17 | 542 | 4 | 624 | 0.5335 |
0.6355 |
| 5nnj-assembly2.cif.gz_C | 17 | 542 | 1 | 563 | 0.5306 |
0.6329 |
| 5nnj-assembly2.cif.gz_D | 18 | 542 | 2 | 565 | 0.5302 |
0.6342 |
| 5mri-assembly1.cif.gz_A | 17 | 542 | 3 | 576 | 0.5287 |
0.637 |
| 4n7e-assembly1.cif.gz_A | 17 | 545 | 2 | 570 | 0.5277 |
0.6286 |
| 3f6k-assembly1.cif.gz_A | 17 | 545 | 2 | 573 | 0.5249 |
0.6275 |
| 5mrh-assembly1.cif.gz_A | 17 | 545 | 2 | 561 | 0.5176 |
0.6132 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q12884-F1-model_v4 | 40 | 511 | 55 | 555 | 0.4574 |
0.6403 |