PROTEIN: Rep_142_c_5_20
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Protein File & Metadata
Source:
Rep_142_c_5_20.pdb
Genome ID:
Protein ID:
Rep_142_c_5_20
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Protein Sequence
MSLVQIKKVE TKKDLKTFID FHYDLYEGCP YDVPNLFSDD MNTLSKDKNA AFDFCEAEYY 60 LAYKAGKLVG RVAAIINNKA NEKWQTKNVR FGWIDFVDDI EVSEALLKAV GDFGRSRGME 120 QIVGPLGFTD MDPEGMLTWG FDKLGTMVTI YNYEYYPKHL EQLGGWEKDN DYIEQFLVVP 180 QEIPEKYAKI ANMIQHRYNL KVKKLTKKDV FEGGYGRKLF EIVNETYKDL YGFSQLTDRQ 240 IDQYVQMYFP LANLDFITVI LDGNKNDAIA GMGITIPSLS RALQKCHRGR LYPFGWWHLL 300 RAIKFNKTEG VDCLLVGFLP EYRSKGANAL LFADLIPRFA KAGFKWGESQ VEMETNEGVQ 360 SQWGPLNPEI HKRRRCWKKS IL 382
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q46840-F1-model_v4 | 1 | 381 | 15 | 390 | 0.8995 |
0.9352 |
| AF-X8EWX4-F1-model_v4 | 1 | 381 | 18 | 393 | 0.8939 |
0.9334 |
| AF-K0EMI4-F1-model_v4 | 1 | 382 | 11 | 315 | 0.7077 |
0.8203 |
| AF-Q54G61-F1-model_v4 | 3 | 381 | 1 | 307 | 0.6567 |
0.7509 |
| AF-K0EYT8-F1-model_v4 | 1 | 380 | 9 | 259 | 0.6332 |
0.7926 |
| AF-K0EUT6-F1-model_v4 | 1 | 382 | 14 | 316 | 0.6111 |
0.7172 |
| AF-Q9NAR1-F1-model_v4 | 1 | 380 | 26 | 332 | 0.6061 |
0.737 |
| AF-O02226-F1-model_v4 | 1 | 380 | 36 | 332 | 0.6051 |
0.7554 |
| AF-A0A077ZCP6-F1-model_v4 | 30 | 381 | 1 | 249 | 0.6041 |
0.7504 |
| AF-A0A0H3GGI2-F1-model_v4 | 17 | 379 | 7 | 224 | 0.595 |
0.7825 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T427-F1-model_v4 | GH13 | 1 | 381 | 15 | 339 | 0.748 |
0.8421 |
| AF-Q2UKN1-F1-model_v4 | GH3 | 1 | 382 | 410 | 740 | 0.4954 |
0.7473 |
| AF-A0A1D9PUT2-F1-model_v4 | GH3 | 1 | 382 | 581 | 968 | 0.4842 |
0.6997 |
| AF-A0A384J7C8-F1-model_v4 | GH3 | 1 | 382 | 583 | 956 | 0.4811 |
0.7059 |
| A0A7C8H9M3 | GH3 | 1 | 379 | 550 | 877 | 0.4806 |
0.7714 |
| AF-G2XQQ8-F1-model_v4 | GH3 | 1 | 382 | 606 | 981 | 0.48 |
0.7049 |
| AF-A0A146FCW8-F1-model_v4 | GH3 | 1 | 381 | 530 | 859 | 0.4778 |
0.7582 |
| AF-A2QDM1-F1-model_v4 | GH3 | 1 | 381 | 104 | 859 | 0.4768 |
0.6661 |
| AF-A0A7U2MF49-F1-model_v4 | GH3 | 1 | 382 | 73 | 834 | 0.4763 |
0.6583 |
| AF-A0A7R7ZLS0-F1-model_v4 | GH3 | 1 | 379 | 536 | 854 | 0.4747 |
0.7754 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T427 | GH13 | 1 | 381 | 15 | 339 | 0.748 |
0.8421 |
| A0A7C8H9M3 | GH3 | 1 | 379 | 550 | 877 | 0.4806 |
0.7714 |
| UPL03096.1 | GH3 | 1 | 382 | 249 | 966 | 0.4804 |
0.6935 |
| A0A7U2MF49 | GH3 | 1 | 382 | 73 | 834 | 0.4763 |
0.6583 |
| V9M3A9 | GH3 | 1 | 379 | 536 | 858 | 0.4709 |
0.76 |
| A0A7H8QUW2 | GH3 | 1 | 382 | 209 | 947 | 0.467 |
0.67 |
| Q6MFP1 | GH3 | 1 | 382 | 582 | 1082 | 0.4651 |
0.692 |
| E5A892 | GH3 | 1 | 382 | 540 | 884 | 0.4648 |
0.7142 |
| A0A161HFD8 | GH3 | 1 | 382 | 570 | 968 | 0.4645 |
0.6705 |
| G1XST4 | GH3 | 1 | 382 | 606 | 1003 | 0.46 |
0.6705 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5kgh-assembly1.cif.gz_A | 4 | 382 | 1 | 316 | 0.7278 |
0.8157 |
| 5kga-assembly1.cif.gz_B | 4 | 382 | 1 | 316 | 0.7251 |
0.813 |
| 2c27-assembly1.cif.gz_A | 7 | 380 | 1 | 301 | 0.7247 |
0.8271 |
| 5kf2-assembly1.cif.gz_A | 4 | 382 | 1 | 316 | 0.7242 |
0.8132 |
| 7q3a-assembly1.cif.gz_A | 1 | 381 | 18 | 339 | 0.723 |
0.8228 |
| 5kgh-assembly1.cif.gz_B | 4 | 382 | 1 | 313 | 0.7224 |
0.8132 |
| 5kf1-assembly1.cif.gz_B | 4 | 382 | 1 | 312 | 0.7205 |
0.8123 |
| 7q3a-assembly2.cif.gz_B | 1 | 381 | 17 | 340 | 0.7181 |
0.8147 |
| 1p0h-assembly1.cif.gz_A | 4 | 379 | 1 | 290 | 0.7101 |
0.8253 |
| 2wpw-assembly4.cif.gz_D | 3 | 382 | 1 | 322 | 0.6795 |
0.7619 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q46840-F1-model_v4 | 1 | 381 | 15 | 390 | 0.8995 |
0.9352 |
| AF-D3Q4A8-F1-model_v4 | 3 | 381 | 1 | 306 | 0.7603 |
0.8605 |
| AF-Q5EDG0-F1-model_v4 | 3 | 379 | 1 | 301 | 0.747 |
0.8521 |
| AF-B0RAV5-F1-model_v4 | 1 | 380 | 9 | 304 | 0.7457 |
0.8668 |
| AF-C6WPR7-F1-model_v4 | 3 | 379 | 1 | 297 | 0.7443 |
0.8543 |
| AF-A5CTZ8-F1-model_v4 | 1 | 380 | 11 | 306 | 0.7441 |
0.8676 |
| AF-C1ATC6-F1-model_v4 | 1 | 380 | 1 | 305 | 0.7434 |
0.8448 |
| AF-D1A4F4-F1-model_v4 | 1 | 382 | 1 | 297 | 0.7426 |
0.8522 |
| AF-B8HD44-F1-model_v4 | 1 | 382 | 4 | 322 | 0.7412 |
0.8294 |
| AF-A4X1M6-F1-model_v4 | 1 | 380 | 5 | 307 | 0.7405 |
0.8482 |