PROTEIN: Rep_142_c_43_15
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Protein File & Metadata
Source:
Rep_142_c_43_15.pdb
Genome ID:
Protein ID:
Rep_142_c_43_15
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Protein Sequence
MKVYIDSRVE YRYSSFYRLG IYRLIGKKNV IYSASKFQDL PNETSSQFGC GLQIICEKNG 60 VEKKIYFDIK DIAEVEQDKY EWADIYAKVN VKAGDLERYP KLVVSGPQCG LRNRSLLSLI 120 LFGLCNYIKS FSSSKVSYKL YLQTYLYPYA RRRPLSAYES NSEVKSNYIF HASTLWYNEF 180 AATDTNKYRG EFLKACQRAG LEIEGGLFYV GGEAVLKEMP DYPKYKEEYK DFIYDKRLSM 240 DDYITKTKES VVVFNTPSVC GCHGWKLAEY LCMGKAIIST PLSREMPAPM EHGKHIHFVH 300 SVDEIYDAVV KINTDEAYRK QLEEGARAYY EQWLAPEVVV KRIIKLAFKG A 351
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q5F734-F1-model_v4 | 1 | 347 | 3 | 354 | 0.6114 |
0.6465 |
| AF-Q19265-F1-model_v4 | 1 | 351 | 1 | 400 | 0.6078 |
0.6675 |
| AF-Q5FAD9-F1-model_v4 | 2 | 351 | 1 | 354 | 0.6053 |
0.636 |
| AF-A0A1D6E1K2-F1-model_v4 | 1 | 351 | 18 | 414 | 0.6021 |
0.672 |
| AF-A0A0N4UFD9-F1-model_v4 | 1 | 351 | 1 | 401 | 0.6007 |
0.6607 |
| AF-A0A2K6WNG9-F1-model_v4 | 1 | 351 | 1 | 403 | 0.5998 |
0.6633 |
| AF-Q7XLZ9-F1-model_v4 | 1 | 351 | 19 | 415 | 0.5985 |
0.668 |
| AF-K0F3N9-F1-model_v4 | 1 | 351 | 1 | 365 | 0.5981 |
0.6408 |
| AF-Q58469-F1-model_v4 | 1 | 351 | 3 | 392 | 0.5975 |
0.6513 |
| AF-Q9I1N1-F1-model_v4 | 1 | 351 | 1 | 398 | 0.5952 |
0.6544 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-F4BT06-F1-model_v4 | GT4 | 1 | 351 | 1 | 366 | 0.6311 |
0.6671 |
| AF-A0A481RIR3-F1-model_v4 | GT4 | 1 | 351 | 6 | 395 | 0.6257 |
0.6819 |
| AF-E6X1A2-F1-model_v4 | GT4 | 1 | 351 | 1 | 338 | 0.6253 |
0.6625 |
| QYK00272.1 | GT4 | 1 | 351 | 1 | 361 | 0.623 |
0.6554 |
| AF-A0A0E3QSB8-F1-model_v4 | GT4 | 1 | 351 | 1 | 377 | 0.6228 |
0.6681 |
| AF-A0A7T4WKV0-F1-model_v4 | GT4 | 1 | 351 | 3 | 362 | 0.6225 |
0.6543 |
| AF-A0A7G9Z2K1-F1-model_v4 | GT4 | 5 | 351 | 1 | 374 | 0.6197 |
0.6679 |
| QFY72027.1 | GT4 | 1 | 351 | 7 | 360 | 0.6193 |
0.6502 |
| AF-A0A0G3EFC1-F1-model_v4 | GT4 | 1 | 351 | 4 | 353 | 0.6184 |
0.653 |
| AF-A0A075FKH1-F1-model_v4 | GT4 | 1 | 351 | 1 | 368 | 0.6181 |
0.6575 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| H5SVF0 | GT4 | 2 | 351 | 1 | 334 | 0.6426 |
0.6877 |
| W5WBJ8 | GT4 | 1 | 351 | 1 | 340 | 0.6314 |
0.6749 |
| A0A481RIR3 | GT4 | 1 | 351 | 6 | 395 | 0.6257 |
0.6819 |
| A0A3S5BCK0 | GT4 | 1 | 351 | 1 | 351 | 0.6255 |
0.6556 |
| A0A6B9Z3W8 | GT4 | 1 | 351 | 1 | 354 | 0.6253 |
0.6529 |
| E6X1A2 | GT4 | 1 | 351 | 1 | 338 | 0.6253 |
0.6625 |
| A0A6N1CP16 | GT4 | 1 | 351 | 3 | 362 | 0.6251 |
0.6583 |
| WHT17750.1 | GT4 | 1 | 351 | 1 | 343 | 0.6248 |
0.6634 |
| QYK00272.1 | GT4 | 1 | 351 | 1 | 361 | 0.623 |
0.6554 |
| WJI08693.1 | GT4 | 1 | 351 | 1 | 373 | 0.6198 |
0.6628 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7qsg-assembly2.cif.gz_B | 1 | 351 | 1 | 304 | 0.6559 |
0.7255 |
| 2jjm-assembly1.cif.gz_B | 1 | 351 | 1 | 359 | 0.6143 |
0.6464 |
| 5ze7-assembly1.cif.gz_B | 1 | 351 | 2 | 352 | 0.6019 |
0.6271 |
| 7qsg-assembly1.cif.gz_A | 1 | 351 | 4 | 377 | 0.5996 |
0.6449 |
| 3mbo-assembly2.cif.gz_C | 1 | 351 | 1 | 371 | 0.5969 |
0.6389 |
| 7mi0-assembly1.cif.gz_A | 1 | 351 | 2 | 378 | 0.5887 |
0.634 |
| 4nc9-assembly5.cif.gz_A | 1 | 351 | 3 | 358 | 0.5743 |
0.6122 |
| 4n9w-assembly1.cif.gz_A | 1 | 351 | 1 | 351 | 0.574 |
0.6072 |
| 4nc9-assembly6.cif.gz_D | 1 | 351 | 1 | 350 | 0.5729 |
0.6072 |
| 5ub5-assembly1.cif.gz_A | 20 | 351 | 23 | 338 | 0.5566 |
0.635 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8KQL6-F1-model_v4 | 2 | 351 | 1 | 329 | 0.6327 |
0.6796 |
| AF-Q9R9N1-F1-model_v4 | 1 | 351 | 1 | 340 | 0.6302 |
0.662 |
| AF-Q4JAK2-F1-model_v4 | 1 | 351 | 1 | 352 | 0.6178 |
0.6455 |
| AF-P42982-F1-model_v4 | 1 | 351 | 2 | 377 | 0.6074 |
0.6505 |
| AF-Q93P60-F1-model_v4 | 1 | 351 | 1 | 390 | 0.6023 |
0.6606 |
| AF-P54490-F1-model_v4 | 2 | 351 | 1 | 355 | 0.6005 |
0.6334 |
| AF-Q58469-F1-model_v4 | 1 | 351 | 3 | 392 | 0.5975 |
0.6513 |
| AF-A0R2E2-F1-model_v4 | 2 | 351 | 1 | 387 | 0.593 |
0.6464 |
| AF-P9WMZ1-F1-model_v4 | 2 | 351 | 1 | 387 | 0.5927 |
0.6463 |
| AF-Q9DBE8-F1-model_v4 | 1 | 351 | 14 | 415 | 0.5922 |
0.6614 |