PROTEIN: Rep_1398_c_4_3
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Protein File & Metadata
Source:
Rep_1398_c_4_3.pdb
Genome ID:
Protein ID:
Rep_1398_c_4_3
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Protein Sequence
MKRELSLKGF ILTFSLFLIL LFQNVLEQYI TILKSFDEGL FVLLFILSLY RAFKDRRELI 60 ENNENLVQNN LIILFCMIIM FVVGIVGNII YKYQVIPAVV SDILLVFKGF VSYVSVKIIF 120 NNISFEKYSK TINNTLRAIS VLSFIMIFMN YILNIFPTKD IRFGLPSQML LFTEPTYLAT 180 FAISVMVLLT FFIKSYKKNI YFIIAISIVV CSTLRSKAIM FIAIYLFLYI LIIIKDFRLN 240 TKSIIGVGTA AAVVGGNQIL RYLSNIDWAR PRLMVKSFEV AMDHFPIGGG FATFATWNSG 300 VHYSPLYYKY DLSNTWGLQP DFYMFVGDTY WPAILGQFGF IGLISVVVIL IMIYKNICIN 360 KDKYKYFQQL SILLYLLVLS TGETSFMSPI ATLLCVIMAI 400
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9HUG6-F1-model_v4 | 5 | 400 | 15 | 379 | 0.6473 |
0.7285 |
| AF-A0A0H3H4H7-F1-model_v4 | 3 | 400 | 8 | 379 | 0.6373 |
0.6974 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A212QE91-F1-model_v4 | GT2 | 4 | 400 | 3 | 396 | 0.5668 |
0.7264 |
| AF-M1FGR5-F1-model_v4 | GT2 | 3 | 400 | 3 | 397 | 0.5665 |
0.7259 |
| AF-E4PMS8-F1-model_v4 | GT2 | 4 | 400 | 3 | 396 | 0.5645 |
0.7235 |
| AF-A0A0K1UBS5-F1-model_v4 | GT2 | 4 | 400 | 3 | 396 | 0.5638 |
0.7227 |
| AF-A0A3Q9NIF5-F1-model_v4 | GT2 | 2 | 400 | 1 | 395 | 0.5616 |
0.717 |
| AF-A0A346S464-F1-model_v4 | GT2 | 4 | 400 | 3 | 396 | 0.5598 |
0.7183 |
| AF-A0A1D9GRK7-F1-model_v4 | GT2 | 6 | 400 | 1 | 391 | 0.5594 |
0.7201 |
| QSP96058.1 | GT2 | 1 | 400 | 4 | 402 | 0.5593 |
0.711 |
| AF-A0A6C0U049-F1-model_v4 | GT2 | 3 | 400 | 4 | 398 | 0.5568 |
0.7125 |
| A0A9Q9IL13 | GT4 | 3 | 400 | 15 | 486 | 0.5456 |
0.7725 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QSP96058.1 | GT2 | 1 | 400 | 4 | 402 | 0.5593 |
0.711 |
| A0A9Q9IL13 | GT4 | 3 | 400 | 15 | 486 | 0.5456 |
0.7725 |
| B5YD26 | GT9 | 3 | 400 | 39 | 437 | 0.5408 |
0.7239 |
| A0A517MXC4 | GT26 | 4 | 400 | 20 | 436 | 0.5383 |
0.7127 |
| WBY01952.1 | GT9 | 1 | 400 | 4 | 400 | 0.5281 |
0.7046 |
| M4X4V7 | GH39 | 5 | 400 | 19 | 409 | 0.526 |
0.7412 |
| D5MJ04 | GT9 | 3 | 400 | 23 | 405 | 0.5239 |
0.7235 |
| H8L3P3 | GT2 | 3 | 400 | 12 | 383 | 0.5179 |
0.7254 |
| K0J022 | GT4 | 2 | 400 | 1 | 392 | 0.5146 |
0.6921 |
| K2DNF3 | GT83 | 5 | 400 | 18 | 438 | 0.5077 |
0.726 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7tpj-assembly1.cif.gz_B | 2 | 400 | 1 | 392 | 0.6697 |
0.7085 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9HUG6-F1-model_v4 | 5 | 400 | 15 | 379 | 0.6473 |
0.7285 |
| AF-P37784-F1-model_v4 | 5 | 400 | 1 | 364 | 0.6452 |
0.7127 |
| AF-P26471-F1-model_v4 | 3 | 400 | 12 | 400 | 0.6362 |
0.6805 |