PROTEIN: Rep_108_c_9_13
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Protein File & Metadata
Source:
Rep_108_c_9_13.pdb
Genome ID:
Protein ID:
Rep_108_c_9_13
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Protein Sequence
MVRRKERKRL RRILGWTVMG LLVILLGCSF VLARRHVSYA IYPSRTAIRI QDTGKGRFLQ 60 EREVAAALPI DLKDSISRGV DPEKIERDLV DASTYIRSAT AYISPSTMRL HVIVHERTPI 120 IRYSRNGATW YLDDEGISVP QRRGSTAYVP LAEGAMTDGT IHYVLYPLAQ YLYEHSEWSH 180 FFGYIEILSE SKIHLYPRVG TVVFELHGLE TLEQDLAKIP VYYNKIEPQV GTNKYSLVKL 240 SYDNQIVCVK REK 253
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q5F6M1-F1-model_v4 | 2 | 253 | 1 | 232 | 0.6382 |
0.7138 |
| AF-K0ELF0-F1-model_v4 | 29 | 248 | 46 | 248 | 0.6133 |
0.7694 |
| AF-G3XDA7-F1-model_v4 | 38 | 253 | 74 | 274 | 0.5852 |
0.7877 |
| AF-P9WNA1-F1-model_v4 | 1 | 248 | 85 | 314 | 0.5635 |
0.7022 |
| AF-Q9CCE5-F1-model_v4 | 4 | 248 | 115 | 341 | 0.554 |
0.72 |
| AF-A0A0H3GN94-F1-model_v4 | 38 | 253 | 64 | 268 | 0.5193 |
0.6851 |
| AF-Q7CR81-F1-model_v4 | 39 | 253 | 54 | 258 | 0.5155 |
0.6728 |
| AF-Q32JZ9-F1-model_v4 | 39 | 253 | 53 | 258 | 0.5107 |
0.6639 |
| AF-P06136-F1-model_v4 | 39 | 253 | 53 | 258 | 0.5101 |
0.6627 |
| AF-A0A132Z7A8-F1-model_v4 | 39 | 252 | 134 | 335 | 0.5081 |
0.7774 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6h9o-assembly2.cif.gz_C | 43 | 253 | 1 | 193 | 0.607 |
0.7219 |
| 2vh2-assembly1.cif.gz_A | 42 | 253 | 1 | 198 | 0.5949 |
0.7028 |
| 2vh2-assembly2.cif.gz_B | 42 | 253 | 3 | 197 | 0.5947 |
0.711 |
| 6h9o-assembly1.cif.gz_A | 43 | 253 | 1 | 194 | 0.5929 |
0.7052 |
| 2vh1-assembly1.cif.gz_A | 42 | 253 | 1 | 200 | 0.5905 |
0.6945 |
| 2vh1-assembly2.cif.gz_B | 42 | 253 | 1 | 196 | 0.5875 |
0.6948 |
| 8hhh-assembly1.cif.gz_Q | 39 | 253 | 32 | 237 | 0.5448 |
0.6703 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q4UKP2-F1-model_v4 | 1 | 252 | 18 | 267 | 0.7192 |
0.7731 |
| AF-Q92IT6-F1-model_v4 | 1 | 252 | 19 | 267 | 0.7169 |
0.7737 |
| AF-Q1RHX3-F1-model_v4 | 1 | 252 | 18 | 267 | 0.7001 |
0.7559 |
| AF-Q9ZDS5-F1-model_v4 | 1 | 252 | 18 | 267 | 0.6939 |
0.7492 |
| AF-P45503-F1-model_v4 | 39 | 251 | 5 | 208 | 0.6842 |
0.7895 |
| AF-Q68XB9-F1-model_v4 | 1 | 252 | 17 | 266 | 0.6803 |
0.7352 |
| AF-P94336-F1-model_v4 | 26 | 249 | 14 | 222 | 0.6736 |
0.7836 |
| AF-O66807-F1-model_v4 | 13 | 253 | 1 | 216 | 0.6635 |
0.7447 |
| AF-A5I1U0-F1-model_v4 | 4 | 251 | 6 | 256 | 0.6622 |
0.7132 |
| AF-B1L171-F1-model_v4 | 5 | 251 | 7 | 256 | 0.6536 |
0.7075 |