PROTEIN: Rep_1001_c_5_53
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Protein File & Metadata
Source:
Rep_1001_c_5_53.pdb
Genome ID:
Protein ID:
Rep_1001_c_5_53
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Protein Sequence
MDQNHYCYFP LNQNEAVRYW QLSAISSQRY DVPNAPMSGE MDPFFFLSQH KNFIPHTYPC 60 RTQFQQHYAG KKPTPFGDTT LKNWWFPFGS DRVDLSGFWF RATRIGAQAE TYLVAEQGGL 120 YRFRLTTCGA ACITLNGGDV AWQADYQRNL ESTVEFALML DAGVNTIAVW FDDLAERDAR 180 FFFQLDYVEG APLQVALATP IEADRVRQME ALLEGMAFEQ PTYTGGTVRL CFPIPAPETL 240 NLNIRVQGDF ISLDQPVLLN AVLHQGETVA EIAESDALPA DFRHFVISME KDNFHIRRTL 300 GVEICHAEQQ AQVPKTADAR ADEALMHVAL HGEYSSVKAL ARLACGRDDT ETQNMLEGVL 360 TPVEECHDCA DFTLVPLLWC RIQWADRIAA PVREKMDRAI LAFRYWMDEP GNDVQWYFSE 420 NHALLFHTAA YLAGSTFPDK TFVRSGRLGY EQAEAGRQRV LAWLDHFEQC EMAEWNSAPY 480 FPIDLKGLTA LAALAPDADI VARSQRAILR LLEQIARSSH QGMLTASQGR SYEHTLRAGR 540 SLELSAISRL LWGKGNVGCR FHALPQLALL LKQGKLTLSP ELAKVAVWQG DSALEWYFAQ 600 GLNRIARLYH YKTRDVAMGS LAGYRWDEWG YQETPIHLRI GETPEAQIWI NHPGERLHSG 660 FGRPSYWGGC GTLPRVQQYR GLTIVLFRVH EGQPDFSHAW LPQRYFEDVR CYDKRILLRS 720 GKGMVQISGN RAFQRIAHGP TQHCEVRLPG QETCWLIRLN DDPRLDNLAD FEARFAQLTV 780 ERREDGTFYV NDPQYGEVFF QPNGCVFGQG RLLDPDSWTI SGDSHELPL 829
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A517ZPE3 | CBM67 | 22 | 826 | 89 | 788 | 0.5676 |
0.6739 |
| A0A517ST81 | CE12 | 308 | 826 | 194 | 840 | 0.5122 |
0.8173 |
| WHI49178.1 | CBM92 | 372 | 803 | 1 | 525 | 0.4267 |
0.8557 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.