PROTEIN: HRGMv2_4800_8_100
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Protein File & Metadata
Source:
HRGMv2_4800_8_100.pdb
Genome ID:
Protein ID:
HRGMv2_4800_8_100
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Protein Sequence
MKLIQGKTVG LAILSYKSPQ TLSKTLENYA RVHLKEMFDD ACVVFQSVGP KDLAVADKWE 60 YRTVASGHYL GVIEDLRLTL ENMRTDYILL MENDCPIEPN LSERDVRAEL EKAVRLLADG 120 EADMVRLRHA WRPGGSSNAA AKYSRYYDVN QLSASWQNAE KLSNSPQWVK KMRRLLFPKE 180 ARHSIGRAVY VEENPHLCFP DDIRKVGSFY IVDSAVFPWT NQPSLIPRRF LEQSLVRLSR 240 VQQGLVNMSP DDLERLFNSR RWDSEHFRIA ISKGIFTHTL KA 282
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CI93-F1-model_v4 | 2 | 282 | 2 | 238 | 0.6141 |
0.7262 |
| AF-Q9VIU7-F1-model_v4 | 2 | 282 | 1 | 217 | 0.6093 |
0.745 |
| AF-A0A0N4UMA5-F1-model_v4 | 1 | 282 | 15 | 255 | 0.6078 |
0.7196 |
| AF-I1KLS1-F1-model_v4 | 3 | 282 | 6 | 220 | 0.6022 |
0.7448 |
| AF-Q9LM93-F1-model_v4 | 3 | 282 | 9 | 223 | 0.5963 |
0.7426 |
| AF-Q7AQL8-F1-model_v4 | 1 | 282 | 4 | 217 | 0.5913 |
0.7295 |
| AF-Q6DEJ9-F1-model_v4 | 3 | 282 | 11 | 227 | 0.5912 |
0.7341 |
| AF-A0A077ZBS5-F1-model_v4 | 3 | 282 | 4 | 220 | 0.5907 |
0.7266 |
| AF-A0A175WDL6-F1-model_v4 | 3 | 282 | 7 | 222 | 0.5885 |
0.7293 |
| AF-A0A0D2EYM8-F1-model_v4 | 4 | 282 | 3 | 222 | 0.5851 |
0.7126 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A7S7Z345-F1-model_v4 | GT2 | 8 | 279 | 1 | 189 | 0.6427 |
0.7896 |
| AF-A0A518AZ35-F1-model_v4 | GT2 | 3 | 282 | 1 | 219 | 0.6316 |
0.7659 |
| AF-A0A2X3KZ24-F1-model_v4 | GT2 | 7 | 282 | 1 | 185 | 0.6284 |
0.8296 |
| AF-A0A410FU59-F1-model_v4 | GT2 | 7 | 282 | 1 | 185 | 0.6271 |
0.828 |
| AF-I3VWD2-F1-model_v4 | GT2 | 7 | 282 | 1 | 187 | 0.6247 |
0.8154 |
| UFN49754.1 | GT2 | 3 | 282 | 3 | 237 | 0.6241 |
0.742 |
| AF-H5SUR0-F1-model_v4 | GT2 | 4 | 282 | 1 | 185 | 0.6229 |
0.8245 |
| AF-H5SDJ4-F1-model_v4 | GT2 | 4 | 282 | 1 | 185 | 0.6224 |
0.8239 |
| AF-A0A4V1ACL4-F1-model_v4 | GT2 | 3 | 282 | 6 | 212 | 0.6201 |
0.7951 |
| AF-A0A7G6E0F0-F1-model_v4 | GT2 | 7 | 282 | 1 | 195 | 0.6198 |
0.7987 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9E8SZB0 | GT2 | 2 | 281 | 8 | 208 | 0.6539 |
0.7961 |
| A0A182D2B3 | GT2 | 8 | 282 | 1 | 196 | 0.65 |
0.7866 |
| A0A2S0NG64 | GT2 | 2 | 281 | 15 | 212 | 0.6433 |
0.8009 |
| F0SNS4 | GT2 | 3 | 282 | 3 | 201 | 0.6369 |
0.7725 |
| A0A518AZ35 | GT2 | 3 | 282 | 1 | 219 | 0.6316 |
0.7659 |
| USD60239.1 | GT2 | 6 | 282 | 1 | 227 | 0.6276 |
0.7496 |
| BCN22701.1 | GT2 | 3 | 282 | 1 | 229 | 0.6269 |
0.7462 |
| UOF82070.1 | GT2 | 3 | 282 | 3 | 217 | 0.6258 |
0.7891 |
| UFN49754.1 | GT2 | 3 | 282 | 3 | 237 | 0.6241 |
0.742 |
| H5SDJ4 | GT2 | 4 | 282 | 1 | 185 | 0.6224 |
0.8239 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4d11-assembly4.cif.gz_F | 1 | 281 | 45 | 276 | 0.6108 |
0.7459 |
| 6ifi-assembly1.cif.gz_B | 7 | 282 | 1 | 206 | 0.5678 |
0.6931 |
| 5jqx-assembly1.cif.gz_A | 1 | 282 | 14 | 227 | 0.5639 |
0.7451 |
| 5jqx-assembly1.cif.gz_B | 1 | 282 | 15 | 227 | 0.5609 |
0.7428 |
| 4y9x-assembly1.cif.gz_A | 1 | 282 | 15 | 227 | 0.5609 |
0.7437 |
| 5jsx-assembly1.cif.gz_A-2 | 1 | 282 | 15 | 227 | 0.5595 |
0.7441 |
| 3ckq-assembly1.cif.gz_A-2 | 1 | 282 | 25 | 239 | 0.5485 |
0.745 |
| 4d11-assembly3.cif.gz_C | 2 | 282 | 50 | 285 | 0.5098 |
0.7345 |
| 4d0z-assembly3.cif.gz_C | 1 | 282 | 52 | 287 | 0.4934 |
0.7341 |
| 4d11-assembly1.cif.gz_B | 1 | 282 | 51 | 285 | 0.4926 |
0.7398 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9VIU7-F1-model_v4 | 2 | 282 | 1 | 217 | 0.6093 |
0.745 |
| AF-P9WMY1-F1-model_v4 | 2 | 282 | 1 | 201 | 0.6004 |
0.7506 |
| AF-Q9LM93-F1-model_v4 | 3 | 282 | 9 | 223 | 0.5963 |
0.7426 |
| AF-A0R5Z2-F1-model_v4 | 3 | 281 | 1 | 221 | 0.5891 |
0.7822 |
| AF-A5GFZ5-F1-model_v4 | 3 | 282 | 20 | 236 | 0.5844 |
0.7385 |
| AF-Q1JQ93-F1-model_v4 | 3 | 282 | 21 | 237 | 0.5829 |
0.7374 |
| AF-O70152-F1-model_v4 | 3 | 282 | 21 | 237 | 0.5827 |
0.737 |
| AF-Q03084-F1-model_v4 | 1 | 282 | 1 | 212 | 0.581 |
0.7685 |
| AF-Q58619-F1-model_v4 | 2 | 282 | 12 | 223 | 0.5762 |
0.7229 |
| AF-B8JBN7-F1-model_v4 | 6 | 282 | 1 | 228 | 0.5702 |
0.6685 |