Genome Details
Selected Rep_genome_ID: HRGMv2_4800
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia glycaniphila
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_4800 | 2,835,881 | 94.55% | 0% | UK | Europe | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_4800_CGC3 | CGCFAM_00013 | Yes | 5 | 1 | |
| HRGMv2_4800_CGC37 | CGCFAM_00127 | Yes | 7 | 1 | |
| HRGMv2_4800_CGC12 | CGCFAM_00810 | Yes | 4 | 1 | |
| HRGMv2_4800_CGC8 | CGCFAM_01657 | Yes | 4 | 1 | |
| HRGMv2_4800_CGC27 | CGCFAM_01714 | Yes | 4 | 1 | |
| HRGMv2_4800_CGC18 | CGCFAM_02236 | Yes | 4 | 1 | |
| HRGMv2_4800_CGC30 | CGCFAM_02512 | Yes | 7 | 1 | |
| HRGMv2_4800_CGC40 | CGCFAM_04098 | Yes | 3 | 1 | |
| HRGMv2_4800_CGC16 | CGCFAM_04647 | Yes | 5 | 1 | |
| HRGMv2_4800_CGC39 | CGCFAM_06293 | Yes | 3 | 1 | |
| HRGMv2_4800_CGC15 | CGCFAM_07205 | Yes | 6 | 1 | |
| HRGMv2_4800_CGC5 | CGCFAM_10079 | Yes | 4 | 2 |
Top CAZyme Families