PROTEIN: HRGMv2_4800_1_106
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Protein File & Metadata
Source:
HRGMv2_4800_1_106.pdb
Genome ID:
Protein ID:
HRGMv2_4800_1_106
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Protein Sequence
MTDSNSNSLR RLVHKLGTWP ETVFLFLLGF LVIWYGSTSS PRYGWMYAPD ANIYLTMGQA 60 WLQEGLFPYA DLFDHKGPLI FLIDGLASLI SPGGYTGLYL MESLAMGATF IIWYRMALLL 120 LGSHARRIPL IGVCTMAILI GSKALLPKLS LDSSILSQGG EAELYILCLM SLSLLALLKT 180 RGTRSFLWSM IAGASLAGIS LIKFNLVVYY PLLWGAFCLA DSATTWKNAA RSLMGQISGY 240 LMIIAAMVLI FVLRGHGEQL WNVYIGFNAQ YRPTLSGSLG NMKHLFLDNT AFLTLGGIGA 300 AALGWFPHRR NDLRGWASIS LSLLSYLVLI LMMNGVTIIP GYIYYLIPLL PYFFAALLFF 360 FHGLMNQGTT WEYALPALAA LLYIRDTSIP RNESNSAEVI GELSREITSH AQGRPIRLLC 420 YGCMDSGLYR ALRATPPVFY YMHPNDQEQP DRNGPHSIGR TQDSYIEKGE IDYVLMRYPV 480 NLPPGQKPYY KNTRAQGIMQ NLVEQGTWEP LGDPKPFAPQ VEVRLYARKT DRTAPPAIGN 540 AAQ 543
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A4R7FJY4 | GT83 | 20 | 538 | 15 | 515 | 0.5414 |
0.5885 |
| AF-A0A6S6MTA2-F1-model_v4 | GT83 | 13 | 536 | 4 | 508 | 0.5346 |
0.5755 |
| AF-A0A346YK07-F1-model_v4 | GT83 | 20 | 537 | 14 | 508 | 0.5327 |
0.5832 |
| AF-G8PNF0-F1-model_v4 | GT83 | 18 | 539 | 10 | 522 | 0.5225 |
0.5618 |
| AF-A0A7I8EF78-F1-model_v4 | GT83 | 17 | 530 | 7 | 554 | 0.5198 |
0.5736 |
| AF-A0A6N0JRE1-F1-model_v4 | GT83 | 7 | 531 | 5 | 513 | 0.5184 |
0.5629 |
| AF-A0A2R4XIL7-F1-model_v4 | GT83 | 14 | 532 | 15 | 518 | 0.5163 |
0.5712 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| K4R0C6 | GT83 | 13 | 530 | 17 | 476 | 0.5784 |
0.6518 |
| A0A975CGT2 | GT83 | 10 | 534 | 8 | 506 | 0.5581 |
0.6046 |
| A0A1B7ZBG8 | GT83 | 9 | 528 | 1 | 457 | 0.5559 |
0.6204 |
| A0A0W0Z9P3 | GT83 | 12 | 533 | 13 | 480 | 0.5554 |
0.6206 |
| A0A0D6JH11 | GT83 | 3 | 533 | 6 | 520 | 0.551 |
0.5893 |
| BCT95651.1 | GT83 | 20 | 534 | 1 | 490 | 0.5509 |
0.5998 |
| A0A167A1S4 | GT83 | 6 | 539 | 1 | 493 | 0.5455 |
0.5942 |
| A0A4R7FJY4 | GT83 | 20 | 538 | 15 | 515 | 0.5414 |
0.5885 |
| A0A8D5JSU7 | GT83 | 6 | 536 | 1 | 491 | 0.5397 |
0.586 |
| A0A2S6ZI68 | GT83 | 20 | 533 | 14 | 501 | 0.535 |
0.6021 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.