PROTEIN: HRGMv2_4800_11_14
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Protein File & Metadata
Source:
HRGMv2_4800_11_14.pdb
Genome ID:
Protein ID:
HRGMv2_4800_11_14
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Protein Sequence
MSKKPECNVI CLKWGTRYPA SYTNILYHSV KRHLSRPFRF LCVTDDPSGL DEGIEPHPFP 60 DNPGYEKWPN IFSKLAILQD GFAGLEGPTL FLDVDVVIMQ DIDCFFDYMP GRNCIIHNWI 120 EWHKTLFRKR PAIGNSSIFR FDAGRSGYIF ETFVREFEAA NDHRRYPTEQ AFLTHAMKNP 180 CWWPEEWVKS FKRTCRPVFP LNLLKAPARP DTKILVFHGN PDPDQAVDGF RGKKVHHRVL 240 PAKWILDDWH V 251
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A132Z517-F1-model_v4 | 1 | 251 | 2 | 275 | 0.6932 |
0.7581 |
| AF-A0A132Z6Q5-F1-model_v4 | 2 | 251 | 1 | 274 | 0.684 |
0.766 |
| AF-Q40710-F1-model_v4 | 1 | 251 | 4 | 288 | 0.6773 |
0.7853 |
| AF-P19817-F1-model_v4 | 3 | 251 | 22 | 289 | 0.6749 |
0.7946 |
| AF-A0A0D2G058-F1-model_v4 | 5 | 251 | 10 | 297 | 0.6726 |
0.773 |
| AF-Q329M9-F1-model_v4 | 1 | 251 | 17 | 288 | 0.6724 |
0.7823 |
| AF-A0A0R4J650-F1-model_v4 | 4 | 251 | 18 | 289 | 0.6719 |
0.7833 |
| AF-Q329N1-F1-model_v4 | 2 | 251 | 19 | 291 | 0.6686 |
0.7905 |
| AF-A0A0R0KUR3-F1-model_v4 | 3 | 251 | 23 | 295 | 0.6686 |
0.7835 |
| AF-I1LB22-F1-model_v4 | 4 | 251 | 22 | 293 | 0.6681 |
0.7827 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A6G8JI42-F1-model_v4 | GT8 | 2 | 251 | 1 | 258 | 0.7206 |
0.7705 |
| A0A011P6M1 | GT8 | 2 | 251 | 1 | 258 | 0.7203 |
0.7704 |
| ULJ61750.1 | GT8 | 1 | 251 | 1 | 254 | 0.7132 |
0.7615 |
| AF-A0A2U8FL80-F1-model_v4 | GT8 | 1 | 251 | 3 | 260 | 0.7122 |
0.7634 |
| AF-A0A3G5F7Q2-F1-model_v4 | GT8 | 4 | 251 | 1 | 271 | 0.7054 |
0.7681 |
| AF-A0A3P5YIJ1-F1-model_v4 | GT8 | 4 | 251 | 17 | 288 | 0.6989 |
0.7864 |
| AF-E0TWQ6-F1-model_v4 | GT8 | 1 | 251 | 1 | 273 | 0.6986 |
0.7648 |
| AF-A0A4P7UEV4-F1-model_v4 | GT8 | 7 | 251 | 1 | 262 | 0.6962 |
0.7665 |
| WED65970.1 | GT0 | 3 | 251 | 5 | 259 | 0.6937 |
0.7441 |
| AF-A0A0D4CK16-F1-model_v4 | GT8 | 7 | 251 | 1 | 266 | 0.6919 |
0.7581 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A011P6M1 | GT8 | 2 | 251 | 1 | 258 | 0.7203 |
0.7704 |
| ULJ61750.1 | GT8 | 1 | 251 | 1 | 254 | 0.7132 |
0.7615 |
| A0A2U8FL80 | GT8 | 1 | 251 | 3 | 260 | 0.7122 |
0.7634 |
| A0A3N4WC02 | GT8 | 2 | 251 | 1 | 261 | 0.706 |
0.765 |
| A0A650EJ91 | GT8 | 3 | 251 | 1 | 254 | 0.6901 |
0.783 |
| QMI03407.1 | GT8 | 1 | 251 | 1 | 264 | 0.688 |
0.782 |
| Q726Y5 | GT8 | 1 | 251 | 18 | 285 | 0.6826 |
0.7672 |
| A0ZYL4 | GT8 | 5 | 251 | 1 | 254 | 0.6814 |
0.7574 |
| A0A8H7LMN4 | GT8 | 1 | 251 | 3 | 297 | 0.6754 |
0.7795 |
| R4X2Z3 | GT8 | 3 | 251 | 1 | 259 | 0.6751 |
0.7719 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4ueg-assembly1.cif.gz_B-2 | 5 | 251 | 1 | 243 | 0.7041 |
0.7491 |
| 3t7n-assembly1.cif.gz_A | 3 | 251 | 1 | 248 | 0.7007 |
0.7383 |
| 6eql-assembly1.cif.gz_B | 6 | 251 | 1 | 220 | 0.6977 |
0.7727 |
| 6eql-assembly1.cif.gz_A | 4 | 251 | 1 | 250 | 0.6969 |
0.7354 |
| 3u2w-assembly1.cif.gz_B | 4 | 251 | 1 | 247 | 0.6952 |
0.7354 |
| 1ll0-assembly5.cif.gz_J | 5 | 251 | 1 | 247 | 0.6945 |
0.7304 |
| 1zdg-assembly1.cif.gz_A-2 | 4 | 251 | 1 | 250 | 0.6945 |
0.7368 |
| 3v91-assembly1.cif.gz_A | 4 | 251 | 1 | 249 | 0.6941 |
0.7333 |
| 8cvz-assembly1.cif.gz_J | 4 | 251 | 1 | 251 | 0.693 |
0.7375 |
| 1zcv-assembly1.cif.gz_A-2 | 4 | 251 | 1 | 250 | 0.6929 |
0.7367 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P25148-F1-model_v4 | 1 | 251 | 1 | 273 | 0.6962 |
0.7631 |
| AF-P19817-F1-model_v4 | 3 | 251 | 22 | 289 | 0.6749 |
0.7946 |
| AF-P27129-F1-model_v4 | 2 | 251 | 22 | 291 | 0.6656 |
0.7831 |
| AF-Q9XGN4-F1-model_v4 | 5 | 251 | 21 | 291 | 0.6649 |
0.7864 |
| AF-Q947G8-F1-model_v4 | 4 | 251 | 17 | 278 | 0.6648 |
0.7705 |
| AF-Q4PSY4-F1-model_v4 | 5 | 251 | 18 | 289 | 0.6644 |
0.7844 |
| AF-O22693-F1-model_v4 | 5 | 251 | 21 | 292 | 0.6642 |
0.7865 |
| AF-O80518-F1-model_v4 | 4 | 251 | 13 | 285 | 0.6639 |
0.7833 |
| AF-Q9FFA1-F1-model_v4 | 5 | 251 | 20 | 291 | 0.6638 |
0.7852 |
| AF-Q8H1S1-F1-model_v4 | 4 | 251 | 22 | 294 | 0.6625 |
0.7837 |