PROTEIN: HRGMv2_4775_16_29
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Protein File & Metadata
Source:
HRGMv2_4775_16_29.pdb
Genome ID:
Protein ID:
HRGMv2_4775_16_29
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Protein Sequence
MKKLRLLSAL FFISLFSTFV FAQVGVEVDD EFYFDSLGWY LKGYVESLPQ VKPYPIFVIN 60 DILCQVMEKG DKKEQKKAQE YRIRFFEKKW HISADGNADV KIKLPKKTDS SINNELIHHE 120 LYSGGIYTAG DFLFKNIFGL SYNIGVRGFN NDVLLSQVNP KYIYDSRKQK LKPFAIDFGD 180 VSLLPDSKIS FFMGNKNLFV TAGLNKISYS ISPYSNLILN PNAYQLLNTS FNYYGKHFSY 240 VQIFALLSSN GFSQNYRLNK FLSFHSLSIP LFDNRFSISL FESAVFGNCF TPQYIMPVPF 300 FIMNKIDGSQ ANVLAGLDLT WKPIKSLSIN SELLVDDLGI KDFIKFHWNS AHIRSAFRFG 360 AIYSPENSIC NLMSVDYTIV TPYTYTAYIA GDDSFNTKDY VNAGICIGSE LPPNSDRVIV 420 RLEFKPFSQL KISSFTSFVR HSNPYLSLSD QEVVDLLKSG VSFDSSGSVK TDSRGIDTAE 480 SYTNFLRQEI VMYTVQVGVT GEYEFLTTRN MRISVIGGYK FEYTREDGID TPIYSNLKLP 540 ENDVDGALSL AAVKEAKELW LSNLFDSFNN YLTIGFKIVY 580
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GSK2-F1-model_v4 | 23 | 580 | 24 | 475 | 0.6804 |
0.796 |
| AF-Q9I161-F1-model_v4 | 24 | 580 | 12 | 470 | 0.5807 |
0.6709 |
| AF-P32722-F1-model_v4 | 23 | 580 | 6 | 440 | 0.5761 |
0.6777 |
| AF-Q9I6X0-F1-model_v4 | 35 | 580 | 3 | 443 | 0.5736 |
0.6676 |
| AF-Q9I6P8-F1-model_v4 | 31 | 580 | 9 | 420 | 0.5725 |
0.6883 |
| AF-Q9I202-F1-model_v4 | 1 | 580 | 1 | 408 | 0.5683 |
0.6787 |
| AF-Q9I0E2-F1-model_v4 | 57 | 580 | 3 | 432 | 0.5635 |
0.664 |
| AF-A0A0H3GU17-F1-model_v4 | 86 | 580 | 37 | 466 | 0.5604 |
0.6822 |
| AF-Q9HZH0-F1-model_v4 | 4 | 580 | 1 | 420 | 0.5601 |
0.6622 |
| AF-Q9I4U9-F1-model_v4 | 86 | 580 | 26 | 415 | 0.5575 |
0.6987 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A484X827 | GH1 | 68 | 577 | 128 | 556 | 0.3649 |
0.6069 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A484X827 | GH1 | 68 | 577 | 128 | 556 | 0.3649 |
0.6069 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2ynk-assembly1.cif.gz_A | 23 | 580 | 1 | 439 | 0.693 |
0.8009 |
| 3jty-assembly4.cif.gz_D | 56 | 580 | 1 | 383 | 0.5867 |
0.7179 |
| 4ft6-assembly1.cif.gz_A | 57 | 580 | 3 | 386 | 0.584 |
0.716 |
| 5dl8-assembly2.cif.gz_A | 54 | 580 | 1 | 390 | 0.5839 |
0.7101 |
| 7vu1-assembly1.cif.gz_A | 56 | 580 | 1 | 434 | 0.5835 |
0.6812 |
| 3szd-assembly2.cif.gz_A | 57 | 580 | 2 | 366 | 0.5813 |
0.7262 |
| 3jty-assembly1.cif.gz_A | 56 | 580 | 1 | 387 | 0.581 |
0.7086 |
| 3jty-assembly2.cif.gz_B | 56 | 580 | 1 | 382 | 0.5806 |
0.7117 |
| 3szd-assembly1.cif.gz_B | 56 | 580 | 1 | 368 | 0.5803 |
0.7229 |
| 4fms-assembly1.cif.gz_B | 56 | 580 | 1 | 367 | 0.5788 |
0.72 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q48449-F1-model_v4 | 10 | 580 | 9 | 502 | 0.6634 |
0.7345 |
| AF-P75733-F1-model_v4 | 86 | 580 | 37 | 467 | 0.5629 |
0.6844 |
| AF-Q88JX6-F1-model_v4 | 12 | 580 | 8 | 409 | 0.5629 |
0.6818 |
| AF-Q887Q2-F1-model_v4 | 1 | 580 | 3 | 493 | 0.5524 |
0.6124 |
| AF-P18895-F1-model_v4 | 79 | 580 | 32 | 490 | 0.5464 |
0.6398 |
| AF-Q88NC8-F1-model_v4 | 10 | 580 | 11 | 492 | 0.5394 |
0.6077 |
| AF-Q44497-F1-model_v4 | 19 | 580 | 22 | 484 | 0.5375 |
0.6215 |