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PROTEIN: HRGMv2_4626_2_18

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Protein File & Metadata
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Source:
HRGMv2_4626_2_18.pdb
Genome ID:
HRGMv2_4626
Protein ID:
HRGMv2_4626_2_18

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Detailed structural information will appear here after analysis...

Protein Sequence 
MIIKDNDPYT   SASFSLTHRV   RRQIWNIICL   LLFKPSPRPL   HAWRAALLRI   FGAKIGKGAH 60
IYPGTKIWAP   WNLVVDDYVG   IADGVTIYNM   DIIRIGAYSV   ISQGAHLCGG   SHDYNSQNFQ 120
LYAKPITLGE   HVWICAEAFV   SLGVNIPDGV   VVGARSLVTK   SILEPWTVYA   GHPAKQIGQR 180
TRSES 185
Protein Structure Viewer

Confidence Score (pLDDT)

Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P0ACD2-F1-model_v4 7 184 3 182 0.9144 0.9559
AF-H9L4A1-F1-model_v4 7 185 3 183 0.9118 0.9538
AF-K0EU34-F1-model_v4 1 180 1 178 0.8628 0.9004
AF-P77791-F1-model_v4 1 180 5 183 0.8517 0.895
AF-Q32J39-F1-model_v4 1 180 5 183 0.8512 0.8944
AF-Q552S7-F1-model_v4 1 185 8 190 0.8486 0.8891
AF-Q8ZRA8-F1-model_v4 1 180 5 183 0.8481 0.8916
AF-Q54ED9-F1-model_v4 2 184 6 181 0.8464 0.9012
AF-A0A0H3GKK7-F1-model_v4 1 184 5 187 0.8462 0.883
AF-Q54UU2-F1-model_v4 1 185 9 191 0.8462 0.8887
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A517YPZ3-F1-model_v4 GT2 5 185 310 489 0.6477 0.9735
A0A7M2X016 GT2 7 185 344 521 0.6265 0.9737
AF-A0A518C0G7-F1-model_v4 GT2 7 183 340 515 0.6219 0.9689
AF-A0A6P1YLS6-F1-model_v4 GT4 7 185 11 191 0.6114 0.9554
D8DUW3 GT2 15 185 247 415 0.6022 0.9244
AF-A0A1Z4N893-F1-model_v4 GT2 7 185 294 474 0.5958 0.9101
A0A9W4F949 GT2 7 185 295 478 0.5928 0.9062
AF-A0A345S1R4-F1-model_v4 GT8 21 185 2 190 0.5538 0.7682
AF-A0A402CU73-F1-model_v4 GT2 20 184 341 523 0.4938 0.8182
AF-C1D4M7-F1-model_v4 GT2 36 184 379 549 0.4675 0.8662
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A517YPZ3 GT2 5 185 310 489 0.6477 0.9735
A0A7M2X016 GT2 7 185 344 521 0.6265 0.9737
A0A518C0G7 GT2 7 183 340 515 0.6219 0.9689
A0A6P1YLS6 GT4 7 185 11 191 0.6114 0.9554
D8DUW3 GT2 15 185 247 415 0.6022 0.9244
A0A9W4F949 GT2 7 185 295 478 0.5928 0.9062
A0A345S1R4 GT8 21 185 2 190 0.5538 0.7682
A0A402CU73 GT2 20 184 341 523 0.4938 0.8182
C1D4M7 GT2 36 184 379 549 0.4675 0.8662
A0A5B8KER9 GT4 29 183 428 602 0.4634 0.8477
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
2p2o-assembly1.cif.gz_A 1 181 4 184 0.8528 0.8903
3ect-assembly1.cif.gz_A 1 182 1 176 0.8523 0.8937
3srt-assembly2.cif.gz_B 1 182 6 187 0.8455 0.8852
3nz2-assembly5.cif.gz_I 1 182 5 184 0.8436 0.8851
6ag8-assembly1.cif.gz_C 1 180 4 182 0.8431 0.8854
3igj-assembly1.cif.gz_A 1 182 4 186 0.8422 0.8797
5u2k-assembly1.cif.gz_A 1 185 4 190 0.8361 0.8718
4egg-assembly1.cif.gz_A 1 184 4 188 0.8341 0.87
4dcl-assembly1.cif.gz_A 1 184 4 188 0.8335 0.8695
1kqa-assembly1.cif.gz_A 1 185 3 200 0.8105 0.8648
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P0ACD2-F1-model_v4 7 184 3 182 0.9144 0.9559
AF-P0ACD3-F1-model_v4 7 184 3 182 0.9144 0.956
AF-P37515-F1-model_v4 1 180 6 184 0.8565 0.901
AF-P77791-F1-model_v4 1 180 5 183 0.8517 0.895
AF-Q552S7-F1-model_v4 1 185 8 190 0.8486 0.8891
AF-P28266-F1-model_v4 1 178 6 183 0.8467 0.8946
AF-Q54UU2-F1-model_v4 1 185 9 191 0.8462 0.8887
AF-P08632-F1-model_v4 1 181 6 187 0.8458 0.8947
AF-Q4L967-F1-model_v4 1 185 4 192 0.8312 0.8703
AF-P40892-F1-model_v4 1 184 3 190 0.8307 0.8806
Download Full SwissProt Results