PROTEIN: HRGMv2_4565_38_2
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Protein File & Metadata
Source:
HRGMv2_4565_38_2.pdb
Genome ID:
Protein ID:
HRGMv2_4565_38_2
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Protein Sequence
MQGRTQREIK LNIIIGVSNQ ILILLINLVS KNVILNSLNL DYLGLQTVFG NFCDLFSFAF 60 SGIGFAVLFS LYRPFEDHDQ QRIRIIYRYY DSLYRIISFI VLGVGLISTV IVLFSVNADI 120 SNTEIILTYL TYLISIIAYN RYLMQHYFVI ANQKRYIICL INGLVDTAAL AVEIAVLQLT 180 RNYELFLLCL LFKNIVINGI VLLYLRKIHP YLFEKEEVPE PKDKKSILGN IKDLILYRIG 240 TVMLNSTDSI IVSLLISTAM SGCYANYLFI SNGVLSLVES FYASIVAKIG RLITTHSKQD 300 QFQDFWNVSM VGLWINGFTV TCFFFLVQDF ILLWMGSETQ LTSVIVGLIA LNLYLAGMRQ 360 TTGTYRQSAG IFHKVGEIVV LRGILNLVLS FLLGWFWGLF GILIATTISN LATLYWYEPY 420 LMFRYFGKSF RYEFLYQGLG LLSTAFCLLF TGLAISFLSG SGWLFFLLKA FICFIISNGC 480 YLAMFLLYQR IRNNFIN 497
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2G262-F1-model_v4 | 1 | 490 | 1 | 465 | 0.8502 |
0.9028 |
| AF-Q58467-F1-model_v4 | 1 | 490 | 1 | 495 | 0.8404 |
0.8782 |
| AF-Q8DPI1-F1-model_v4 | 1 | 489 | 1 | 478 | 0.8326 |
0.8787 |
| AF-H9L497-F1-model_v4 | 1 | 490 | 1 | 473 | 0.8264 |
0.8806 |
| AF-A0A0H3GSJ3-F1-model_v4 | 3 | 490 | 1 | 468 | 0.8227 |
0.8747 |
| AF-P77377-F1-model_v4 | 1 | 490 | 1 | 473 | 0.8224 |
0.8768 |
| AF-P26400-F1-model_v4 | 3 | 428 | 5 | 429 | 0.8199 |
0.9009 |
| AF-Q9I1M8-F1-model_v4 | 9 | 493 | 1 | 469 | 0.8176 |
0.8606 |
| AF-Q32ET1-F1-model_v4 | 5 | 490 | 1 | 505 | 0.8108 |
0.8588 |
| AF-P0AF16-F1-model_v4 | 5 | 490 | 1 | 505 | 0.8103 |
0.8583 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 2 | 489 | 1 | 497 | 0.8402 |
0.8864 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 1 | 489 | 35 | 535 | 0.8032 |
0.8685 |
| QNU38870.1 | GT4 | 6 | 490 | 1 | 465 | 0.7392 |
0.8754 |
| QJC17489.1 | GT2 | 1 | 489 | 128 | 831 | 0.6878 |
0.8864 |
| AF-A0A3T0RPT8-F1-model_v4 | GT4 | 1 | 493 | 1 | 485 | 0.6821 |
0.8862 |
| AF-A0A3Q9G719-F1-model_v4 | GT4 | 2 | 497 | 1 | 524 | 0.6741 |
0.8766 |
| AF-D1BIF1-F1-model_v4 | GT4 | 3 | 493 | 6 | 529 | 0.6595 |
0.8843 |
| AF-A0A2U8PPB3-F1-model_v4 | GT4 | 6 | 497 | 1 | 838 | 0.6568 |
0.8368 |
| AF-A0A517Z2I8-F1-model_v4 | GT2 | 1 | 489 | 4 | 478 | 0.6525 |
0.8739 |
| A0A4V3CWU6 | GT4 | 9 | 497 | 2 | 832 | 0.6507 |
0.8362 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 2 | 489 | 1 | 497 | 0.8402 |
0.8864 |
| A0A160T2N7 | GT28 | 1 | 489 | 35 | 535 | 0.8032 |
0.8685 |
| QNU38870.1 | GT4 | 6 | 490 | 1 | 465 | 0.7392 |
0.8754 |
| QJC17489.1 | GT2 | 1 | 489 | 128 | 831 | 0.6878 |
0.8864 |
| A0A3T0RPT8 | GT4 | 1 | 493 | 1 | 485 | 0.6821 |
0.8862 |
| A0A3Q9G719 | GT4 | 2 | 497 | 1 | 524 | 0.6741 |
0.8766 |
| D1BIF1 | GT4 | 3 | 493 | 6 | 529 | 0.6595 |
0.8843 |
| A0A2U8PPB3 | GT4 | 6 | 497 | 1 | 838 | 0.6568 |
0.8368 |
| A0A517Z2I8 | GT2 | 1 | 489 | 4 | 478 | 0.6525 |
0.8739 |
| A0A4V3CWU6 | GT4 | 9 | 497 | 2 | 832 | 0.6507 |
0.8362 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7waw-assembly1.cif.gz_A | 13 | 489 | 1 | 496 | 0.8009 |
0.8526 |
| 6nc6-assembly2.cif.gz_B | 10 | 490 | 1 | 461 | 0.7933 |
0.8422 |
| 7wag-assembly1.cif.gz_A | 9 | 488 | 4 | 503 | 0.7651 |
0.83 |
| 6fhz-assembly1.cif.gz_A | 12 | 429 | 11 | 435 | 0.7593 |
0.8615 |
| 6cc4-assembly1.cif.gz_A | 1 | 489 | 55 | 605 | 0.7509 |
0.8526 |
| 6hfb-assembly3.cif.gz_C | 1 | 427 | 1 | 446 | 0.6607 |
0.7494 |
| 4mlb-assembly1.cif.gz_C | 1 | 427 | 2 | 444 | 0.6577 |
0.7464 |
| 5y50-assembly1.cif.gz_A | 8 | 426 | 9 | 435 | 0.6575 |
0.7565 |
| 3wbn-assembly1.cif.gz_A | 1 | 427 | 1 | 445 | 0.6488 |
0.737 |
| 6gwh-assembly1.cif.gz_A | 1 | 427 | 1 | 434 | 0.648 |
0.7288 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71060-F1-model_v4 | 6 | 490 | 1 | 488 | 0.8627 |
0.9064 |
| AF-Q58467-F1-model_v4 | 1 | 490 | 1 | 495 | 0.8404 |
0.8782 |
| AF-Q48457-F1-model_v4 | 1 | 490 | 1 | 472 | 0.835 |
0.8862 |
| AF-P77377-F1-model_v4 | 1 | 490 | 1 | 473 | 0.8224 |
0.8768 |
| AF-O34238-F1-model_v4 | 1 | 490 | 1 | 519 | 0.8219 |
0.873 |
| AF-O32273-F1-model_v4 | 1 | 487 | 1 | 471 | 0.8201 |
0.8711 |
| AF-P26400-F1-model_v4 | 3 | 428 | 5 | 429 | 0.8199 |
0.9009 |
| AF-Q99191-F1-model_v4 | 3 | 428 | 6 | 430 | 0.8177 |
0.9007 |
| AF-Q8VNZ2-F1-model_v4 | 1 | 490 | 7 | 515 | 0.8177 |
0.8679 |
| AF-Q05347-F1-model_v4 | 3 | 428 | 1 | 428 | 0.8172 |
0.9037 |