PROTEIN: HRGMv2_4564_8_43
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Protein File & Metadata
Source:
HRGMv2_4564_8_43.pdb
Genome ID:
Protein ID:
HRGMv2_4564_8_43
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Protein Sequence
MFVLDSVEAP AAANPRLGRR LAAALAGAGH AVTLLELWDG QTPPPAVPGC RTETLAFADE 60 AAMERALEGG AAGHSPVPLR LARLALHPQA AGAAVRQFLL KAPRRVTDTR RAIQRLDART 120 PFDAVCAVAA PYRAAFALES ARLRGKKLLW QMDPYAANQS YRAPGGYDRE RRLLAAMDHV 180 FITDQALPDF APGGPLAPLA GRVSRLGFPS LVPPEGPAPA VDRQSCVFCG TLYPGLREPG 240 ALLALFGALG GGWTLTMAGG GWDAFAADRA RAEAALGDRL RLPGPVPPDR ARALERSAGV 300 LVSIGNTAAN QLPSKLFEYV AAGKPVLHLA AGDRDAALPY LRRWPLALCL APGDPQAQAA 360 ALRPWLEANA GRQLPFAEAA RLYPDFTPGA VAARFLQALA DPAPETL 407
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2G1J7-F1-model_v4 | 1 | 400 | 7 | 401 | 0.7571 |
0.7937 |
| AF-Q8CWU0-F1-model_v4 | 1 | 403 | 6 | 384 | 0.7556 |
0.8093 |
| AF-Q5FAD9-F1-model_v4 | 1 | 402 | 3 | 354 | 0.7523 |
0.8287 |
| AF-Q2G255-F1-model_v4 | 1 | 404 | 3 | 373 | 0.7521 |
0.8149 |
| AF-K0F3N9-F1-model_v4 | 1 | 402 | 4 | 363 | 0.7512 |
0.8304 |
| AF-Q9I1N1-F1-model_v4 | 1 | 406 | 4 | 402 | 0.7505 |
0.7809 |
| AF-C6TI07-F1-model_v4 | 1 | 405 | 12 | 407 | 0.7499 |
0.7901 |
| AF-Q5F734-F1-model_v4 | 1 | 399 | 7 | 354 | 0.7499 |
0.8333 |
| AF-P26402-F1-model_v4 | 1 | 403 | 2 | 353 | 0.7498 |
0.8269 |
| AF-O05083-F1-model_v4 | 1 | 399 | 4 | 353 | 0.7493 |
0.8294 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A517ZPG7 | GT4 | 1 | 407 | 4 | 442 | 0.8076 |
0.8591 |
| AF-A0A517ZPG7-F1-model_v4 | GT4 | 1 | 407 | 4 | 442 | 0.8076 |
0.8591 |
| A0A139KCQ5 | GT0 | 1 | 401 | 4 | 413 | 0.8047 |
0.8379 |
| A0A0W0VWK4 | GT4 | 1 | 400 | 4 | 431 | 0.8042 |
0.8549 |
| A0A1W1Z2J3 | GT0 | 1 | 402 | 5 | 385 | 0.8001 |
0.8473 |
| AF-A0A4D6GU89-F1-model_v4 | GT4 | 1 | 403 | 13 | 387 | 0.7969 |
0.8584 |
| AF-A6T0A6-F1-model_v4 | GT4 | 1 | 402 | 4 | 435 | 0.794 |
0.8447 |
| AF-T1SF07-F1-model_v4 | GT4 | 1 | 401 | 10 | 424 | 0.7891 |
0.8344 |
| AF-M1VK77-F1-model_v4 | GT4 | 1 | 401 | 9 | 424 | 0.789 |
0.8351 |
| AF-A0A1P8VR31-F1-model_v4 | GT4 | 1 | 401 | 10 | 424 | 0.789 |
0.8347 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A517ZPG7 | GT4 | 1 | 407 | 4 | 442 | 0.8076 |
0.8591 |
| A0A0W0VWK4 | GT4 | 1 | 400 | 4 | 431 | 0.8042 |
0.8549 |
| A0A4D6GU89 | GT4 | 1 | 403 | 13 | 387 | 0.7969 |
0.8584 |
| A6T0A6 | GT4 | 1 | 402 | 4 | 435 | 0.794 |
0.8447 |
| T1SF07 | GT4 | 1 | 401 | 10 | 424 | 0.7891 |
0.8344 |
| A0A0E3UVM0 | GT4 | 1 | 403 | 4 | 389 | 0.7889 |
0.8305 |
| A0A127VKF0 | GT4 | 1 | 402 | 13 | 434 | 0.7841 |
0.8367 |
| A0A371KN06 | GT4 | 1 | 403 | 5 | 398 | 0.7805 |
0.8166 |
| UNU44749.1 | GT4 | 1 | 403 | 28 | 424 | 0.7795 |
0.8355 |
| W8U8I9 | GT4 | 1 | 405 | 4 | 429 | 0.7787 |
0.821 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3mbo-assembly3.cif.gz_F | 1 | 403 | 4 | 366 | 0.7693 |
0.8366 |
| 3mbo-assembly4.cif.gz_G | 1 | 403 | 4 | 362 | 0.7642 |
0.8352 |
| 2jjm-assembly1.cif.gz_B | 1 | 403 | 4 | 359 | 0.7576 |
0.83 |
| 3mbo-assembly4.cif.gz_H | 1 | 403 | 4 | 366 | 0.7567 |
0.8244 |
| 3mbo-assembly1.cif.gz_A | 1 | 403 | 5 | 369 | 0.7564 |
0.8232 |
| 3mbo-assembly3.cif.gz_E | 1 | 403 | 4 | 372 | 0.753 |
0.8154 |
| 3mbo-assembly2.cif.gz_C | 1 | 403 | 4 | 370 | 0.7519 |
0.8166 |
| 7qsg-assembly1.cif.gz_A | 1 | 403 | 7 | 376 | 0.7517 |
0.817 |
| 6n1x-assembly1.cif.gz_A | 1 | 403 | 7 | 375 | 0.7489 |
0.8136 |
| 5d00-assembly1.cif.gz_B | 1 | 402 | 5 | 360 | 0.7452 |
0.8193 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-D4GU66-F1-model_v4 | 4 | 403 | 1 | 372 | 0.7772 |
0.8303 |
| AF-P26402-F1-model_v4 | 1 | 403 | 2 | 353 | 0.7498 |
0.8269 |
| AF-O05083-F1-model_v4 | 1 | 399 | 4 | 353 | 0.7493 |
0.8294 |
| AF-Q93P60-F1-model_v4 | 1 | 403 | 4 | 390 | 0.7467 |
0.7937 |
| AF-Q9R9N0-F1-model_v4 | 1 | 403 | 4 | 340 | 0.746 |
0.8403 |
| AF-Q59002-F1-model_v4 | 1 | 404 | 4 | 387 | 0.746 |
0.7935 |
| AF-O07147-F1-model_v4 | 1 | 402 | 3 | 363 | 0.746 |
0.8228 |
| AF-Q46634-F1-model_v4 | 1 | 400 | 4 | 351 | 0.7452 |
0.8257 |
| AF-Q0P9C7-F1-model_v4 | 1 | 401 | 4 | 365 | 0.7443 |
0.8125 |
| AF-P42982-F1-model_v4 | 1 | 402 | 6 | 373 | 0.7439 |
0.8109 |