PROTEIN: HRGMv2_4563_8_20
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Protein File & Metadata
Source:
HRGMv2_4563_8_20.pdb
Genome ID:
Protein ID:
HRGMv2_4563_8_20
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Protein Sequence
MEFQNIGFHN VEALERCEKG YLIRRLKKET RERIGGGVPE NCFATGTELR FTMPDGAVDL 60 YLRTDLAAES ATAHIFFGSF QGGWEYSSKN IGAEETCIHI EYPVKMQTLR RVAEEQHMPF 120 QPEVVRVVLP YVPVYFVRAE GRTAPPQPAQ LPAKTYLAYG SSITHGSLGL IQPDSYVFRT 180 AQALGTDYLN LGFAGNALME EQMAEYIVSR RDWDFATVEM GINVVERLAQ FPLPLIEERV 240 DRFTAVLAKD PRPIFATSMF GYLDEDPERA GRVRNIVRKY AADRLIFTDG LQLLGNPAYV 300 SADCTHPDAR GQEQIAVRWS GIMREELHRR GVL 333
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0F5D8-F1-model_v4 | 2 | 333 | 7 | 384 | 0.7852 |
0.8562 |
| AF-Q54K12-F1-model_v4 | 2 | 333 | 88 | 421 | 0.627 |
0.7157 |
| AF-X8FH80-F1-model_v4 | 117 | 329 | 39 | 234 | 0.5489 |
0.7713 |
| AF-K0F6E7-F1-model_v4 | 41 | 330 | 51 | 278 | 0.5476 |
0.7536 |
| AF-O53423-F1-model_v4 | 41 | 333 | 44 | 274 | 0.5421 |
0.7576 |
| AF-A0A175VZD1-F1-model_v4 | 114 | 332 | 1 | 215 | 0.5332 |
0.7225 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A5B9YGW9-F1-model_v4 | CE2 | 1 | 333 | 5 | 350 | 0.6866 |
0.7224 |
| AF-A0A3S9CYA4-F1-model_v4 | CE2 | 2 | 330 | 31 | 351 | 0.682 |
0.7454 |
| AF-W0J2U2-F1-model_v4 | CE2 | 2 | 333 | 27 | 358 | 0.679 |
0.726 |
| AF-A0A290ZA39-F1-model_v4 | CE2 | 2 | 332 | 36 | 331 | 0.6784 |
0.7758 |
| AF-A0A089LA82-F1-model_v4 | CE2 | 1 | 333 | 4 | 350 | 0.6743 |
0.7104 |
| AF-A0A517L3Q8-F1-model_v4 | CE0 | 8 | 333 | 1 | 341 | 0.6737 |
0.7324 |
| AF-Q977Y6-F1-model_v4 | CE2 | 1 | 333 | 36 | 365 | 0.6715 |
0.7264 |
| AF-A0A0B4N0V1-F1-model_v4 | CE2 | 2 | 330 | 6 | 341 | 0.6705 |
0.7077 |
| UGU17889.1 | CE2 | 1 | 333 | 27 | 366 | 0.67 |
0.7228 |
| AF-A0A7U4KI86-F1-model_v4 | CE2 | 1 | 333 | 10 | 356 | 0.6668 |
0.708 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1S8L1H6 | CE2 | 2 | 333 | 6 | 334 | 0.6947 |
0.726 |
| D2KFR1 | CE2 | 1 | 333 | 4 | 355 | 0.6848 |
0.726 |
| W0J2U2 | CE2 | 2 | 333 | 27 | 358 | 0.679 |
0.726 |
| A0A387GSP9 | CE2 | 2 | 332 | 38 | 355 | 0.6784 |
0.7492 |
| D9SU32 | CE2 | 1 | 333 | 18 | 364 | 0.6782 |
0.7259 |
| A0A4P8HR50 | CE2 | 1 | 333 | 30 | 354 | 0.6757 |
0.731 |
| A9KNN1 | CE2 | 1 | 333 | 8 | 357 | 0.6757 |
0.7175 |
| QWG10052.1 | CE2 | 1 | 333 | 21 | 349 | 0.672 |
0.7151 |
| A0A0B4N0V1 | CE2 | 2 | 330 | 6 | 341 | 0.6705 |
0.7077 |
| UGU17889.1 | CE2 | 1 | 333 | 27 | 366 | 0.67 |
0.7228 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3skv-assembly3.cif.gz_B | 2 | 333 | 6 | 332 | 0.7968 |
0.8293 |
| 3skv-assembly3.cif.gz_A | 2 | 333 | 10 | 354 | 0.7848 |
0.8299 |
| 4lhs-assembly1.cif.gz_A-2 | 2 | 330 | 6 | 334 | 0.7576 |
0.7916 |
| 4xvh-assembly1.cif.gz_A | 5 | 333 | 1 | 329 | 0.6911 |
0.717 |
| 2waa-assembly1.cif.gz_A | 1 | 333 | 8 | 335 | 0.689 |
0.7221 |
| 4dev-assembly2.cif.gz_B | 1 | 333 | 5 | 372 | 0.6492 |
0.7045 |
| 3u37-assembly2.cif.gz_H | 2 | 333 | 8 | 375 | 0.6487 |
0.7082 |
| 4h08-assembly1.cif.gz_A-2 | 35 | 333 | 1 | 200 | 0.6095 |
0.7754 |
| 5hoe-assembly1.cif.gz_A | 153 | 327 | 1 | 215 | 0.578 |
0.8634 |
| 2q0s-assembly1.cif.gz_F | 153 | 327 | 1 | 214 | 0.5778 |
0.8611 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-B3PIB0-F1-model_v4 | 1 | 333 | 33 | 358 | 0.6675 |
0.7239 |
| AF-O53423-F1-model_v4 | 41 | 333 | 44 | 274 | 0.5421 |
0.7576 |
| AF-P42304-F1-model_v4 | 4 | 333 | 30 | 382 | 0.5124 |
0.5682 |