PROTEIN: HRGMv2_4563_66_13
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Protein File & Metadata
Source:
HRGMv2_4563_66_13.pdb
Genome ID:
Protein ID:
HRGMv2_4563_66_13
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Protein Sequence
MQDVMRVNQK EYKIAKLLGH GKGGYSYLAE REGRFYVLKQ IHHEPCEYYA FGNKIEAERN 60 DYNRLLQTGI RIPRMLDIDI ANERIVKEYI DGPTIYDLVK NGTMKDLYLM QMKEMAKAVY 120 EAGLNIDYFP TNFIVQDEQI FYIDYECNHY MDEWNFENWG IKYWSKTQEF IDYVKQH 177
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-C6TNL5-F1-model_v4 | 8 | 172 | 5 | 185 | 0.6932 |
0.8505 |
| AF-Q94K14-F1-model_v4 | 8 | 172 | 6 | 185 | 0.6885 |
0.8452 |
| AF-A0A0R0FJF0-F1-model_v4 | 7 | 172 | 11 | 196 | 0.6784 |
0.8444 |
| AF-A0A044RGC2-F1-model_v4 | 1 | 172 | 4 | 192 | 0.6742 |
0.812 |
| AF-F1QB90-F1-model_v4 | 4 | 169 | 11 | 193 | 0.6554 |
0.8102 |
| AF-B5WWL2-F1-model_v4 | 1 | 168 | 15 | 205 | 0.6544 |
0.8191 |
| AF-A0A3P7DXE4-F1-model_v4 | 8 | 172 | 9 | 192 | 0.6528 |
0.8159 |
| AF-Q387G5-F1-model_v4 | 2 | 170 | 1 | 205 | 0.6485 |
0.8097 |
| AF-Q9VRJ6-F1-model_v4 | 3 | 169 | 1 | 184 | 0.6479 |
0.787 |
| AF-Q54W07-F1-model_v4 | 4 | 172 | 32 | 211 | 0.6417 |
0.8052 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-W5W9C4-F1-model_v4 | CBM2 | 1 | 177 | 9 | 435 | 0.5248 |
0.7719 |
| AF-A0A0H3D2W5-F1-model_v4 | CBM2 | 1 | 177 | 13 | 440 | 0.5187 |
0.7661 |
| AF-A0A0H3D436-F1-model_v4 | CBM2 | 1 | 176 | 1 | 216 | 0.5097 |
0.7546 |
| AF-A0A290Z8U2-F1-model_v4 | CBM2 | 1 | 176 | 2 | 217 | 0.5013 |
0.7565 |
| A0A9W6NK19 | CBM2 | 1 | 177 | 5 | 464 | 0.4942 |
0.7716 |
| AF-A0A1H2CVS0-F1-model_v4 | CBM13 | 1 | 176 | 2 | 221 | 0.4891 |
0.7823 |
| WDZ83731.1 | CBM32 | 1 | 177 | 52 | 634 | 0.4828 |
0.7713 |
| WDF40215.1 | CBM13 | 1 | 173 | 7 | 228 | 0.4792 |
0.7865 |
| AF-A0A1C3N346-F1-model_v4 | CBM13 | 3 | 176 | 1 | 217 | 0.4698 |
0.7761 |
| QYC39793.1 | GH6 | 1 | 177 | 8 | 646 | 0.4609 |
0.7624 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QUQ64915.1 | CBM2 | 1 | 177 | 2 | 443 | 0.5247 |
0.7753 |
| A0A5Q0H4U0 | CBM2 | 1 | 176 | 2 | 214 | 0.5111 |
0.7611 |
| A0A9W6NK19 | CBM2 | 1 | 177 | 5 | 464 | 0.4942 |
0.7716 |
| A0A1H2CVS0 | CBM13 | 1 | 176 | 2 | 221 | 0.4891 |
0.7823 |
| R4LU84 | CBM32 | 1 | 173 | 13 | 228 | 0.4855 |
0.7611 |
| WDZ83731.1 | CBM32 | 1 | 177 | 52 | 634 | 0.4828 |
0.7713 |
| WDF40215.1 | CBM13 | 1 | 173 | 7 | 228 | 0.4792 |
0.7865 |
| U5W762 | CBM13 | 1 | 177 | 1 | 409 | 0.4785 |
0.7787 |
| A0A1C3N346 | CBM13 | 3 | 176 | 1 | 217 | 0.4698 |
0.7761 |
| QYC39793.1 | GH6 | 1 | 177 | 8 | 646 | 0.4609 |
0.7624 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6x8g-assembly1.cif.gz_A | 7 | 176 | 4 | 210 | 0.6112 |
0.7986 |
| 7ukz-assembly6.cif.gz_F | 6 | 173 | 1 | 202 | 0.5748 |
0.7705 |
| 2vwb-assembly1.cif.gz_A | 17 | 170 | 326 | 488 | 0.454 |
0.7785 |
| 3en9-assembly1.cif.gz_A | 20 | 172 | 328 | 481 | 0.4519 |
0.7803 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9UYB9-F1-model_v4 | 14 | 170 | 1 | 176 | 0.6662 |
0.8469 |
| AF-Q54W07-F1-model_v4 | 4 | 172 | 32 | 211 | 0.6417 |
0.8052 |
| AF-Q99PW4-F1-model_v4 | 5 | 172 | 18 | 203 | 0.6363 |
0.7953 |
| AF-Q96S44-F1-model_v4 | 5 | 169 | 27 | 215 | 0.6296 |
0.8108 |
| AF-Q2NIA4-F1-model_v4 | 14 | 170 | 337 | 504 | 0.4857 |
0.826 |
| AF-O27476-F1-model_v4 | 15 | 170 | 337 | 500 | 0.478 |
0.8165 |
| AF-A5UMH5-F1-model_v4 | 16 | 170 | 340 | 501 | 0.4763 |
0.8202 |
| AF-Q6M056-F1-model_v4 | 15 | 173 | 350 | 512 | 0.4738 |
0.8019 |
| AF-A6VJ51-F1-model_v4 | 15 | 170 | 349 | 513 | 0.4732 |
0.814 |
| AF-A6US28-F1-model_v4 | 15 | 170 | 349 | 513 | 0.4726 |
0.813 |