PROTEIN: HRGMv2_4563_30_11
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Protein File & Metadata
Source:
HRGMv2_4563_30_11.pdb
Genome ID:
Protein ID:
HRGMv2_4563_30_11
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Protein Sequence
MKKSTALKTA SLAMAAAMLA ACGGSAASTA ASTTATAEDG DATAAVENDG YNADLTDIIP 60 DETVTLTAYS QLANSSGEMT GWFAQLLKEK FNVKINIIND ADGVFATRME SGNLGDIVII 120 ANSDNYKEAY SKGMLLDWNE DDLVTDYGPY ISAHMQTALE KNAAISDGTT YGFGYDVGSS 180 AEDLTGFTYN WGLRWDYYKE LGYPAVNTLD DFANVLIDMQ NAHPTDENGK KNYAVSLFSD 240 WDGSMAMFPK AMVSSYYGYD EFGMGFWDPE KQVYISSVGK DSPYVEGLRF YNKLYQNGAL 300 DPDSETQGYD GCSEDYRNGN AFFCPFNFLG TEMYKSVERL QEGTAMFPVV PTEARTLNNG 360 QNIYGGSDRI WCIGSQTEYP ELCMAIINWL STPEGKLDDL YGPKGVCWNY DDDGHTVFTE 420 LGRACITDGN TQMTGGYSGA YKDGNDQMNN TTWSRDAKNP DSNGDDYNWN HWPSNKDAEV 480 STIEQDWRDK TGADSIDDYM ASTNYMVTPG SMYSMTPKSD ELTVVWNQVG DCIKTYSWKA 540 MFASSDEEFD SIIDEMVSKA KSYGSDQCDE FMQSEAALRK TAEDNAKAGK 590
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8DRJ6-F1-model_v4 | 1 | 585 | 27 | 514 | 0.6042 |
0.6932 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 53 | 585 | 41 | 506 | 0.6714 |
0.7949 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5xs8-assembly1.cif.gz_A | 63 | 579 | 1 | 474 | 0.7419 |
0.8361 |
| 5h6u-assembly1.cif.gz_A | 52 | 584 | 1 | 487 | 0.7271 |
0.8114 |
| 5g62-assembly2.cif.gz_B | 60 | 588 | 1 | 491 | 0.7265 |
0.8083 |
| 4tqu-assembly1.cif.gz_Q | 49 | 588 | 3 | 492 | 0.7254 |
0.8093 |
| 3vlw-assembly2.cif.gz_B | 52 | 584 | 1 | 489 | 0.7252 |
0.8082 |
| 6jhx-assembly2.cif.gz_B | 48 | 582 | 2 | 483 | 0.7239 |
0.8121 |
| 6fth-assembly1.cif.gz_A | 56 | 585 | 1 | 496 | 0.7075 |
0.7845 |
| 3omb-assembly1.cif.gz_A | 57 | 581 | 2 | 503 | 0.7001 |
0.7736 |
| 5suo-assembly1.cif.gz_A | 59 | 585 | 1 | 451 | 0.6716 |
0.7757 |
| 5g5y-assembly1.cif.gz_A | 56 | 589 | 1 | 494 | 0.6712 |
0.7498 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H2URD6-F1-model_v4 | 52 | 589 | 39 | 538 | 0.669 |
0.7672 |
| AF-Q795R2-F1-model_v4 | 53 | 581 | 36 | 498 | 0.6154 |
0.7292 |
| AF-P58300-F1-model_v4 | 42 | 574 | 45 | 433 | 0.5623 |
0.7247 |
| AF-O50499-F1-model_v4 | 4 | 580 | 4 | 469 | 0.5599 |
0.6436 |
| AF-O34335-F1-model_v4 | 60 | 571 | 27 | 416 | 0.5557 |
0.709 |
| AF-Q9V297-F1-model_v4 | 27 | 571 | 34 | 452 | 0.5494 |
0.6794 |
| AF-Q9K491-F1-model_v4 | 53 | 568 | 31 | 421 | 0.542 |
0.689 |