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PROTEIN: HRGMv2_4563_1_38

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_4563_1_38.pdb
Genome ID:
HRGMv2_4563
Protein ID:
HRGMv2_4563_1_38

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Detailed structural information will appear here after analysis...

Protein Sequence 
MTHCGPGKPG   PLFYCEEVSL   MKLTLAGTVL   EVSFFCRVED   AWVPVPDSAY   TAHGFDWRIG 60
QAIYRASFCP   TPDGIDYRLY   LNSQTPSQLR   MRIAVPGQEN   YFHVIPCNIY   GDNHAAEAKP 120
GEFPLLTNEH   KGMSFCAPLW   EFRADRAAMP   LSALCWDGGV   AAVSVEPYSP   SGSGYIRNGV 180
FAALPDAFGV   SLGYTNDPVT   FKNRSVPVPS   TRDMTREAEV   KGHIYAVHGP   RTALHEIIRK 240
EYARHHDRAV   PKKTLAQAVQ   GMLDTFAYLN   YDAAAGAYTN   RHCKPPADTE   MRPWRLVTEI 300
GWTGGGVLAY   PLVLCRDVPG   VQADAPLAAA   MSGETLFDRI   VDGYNEQSGL   LNDLMTPNAD 360
GSAVNGWWTG   YGLVKDCHCA   YTVGSAVHYL   TKTMDYLRGK   GRGFPARWLD   TARKVLGTVV 420
ELQRDDGAFG   YTYSATEHKV   LDWSGFAGCW   FAPALVYLYR   LTGEENWLHA   AEKALRYYYG 480
FVKDLNCYGT   PMDTWKAVDE   EGNLAFLRGC   RLVYEVTGSE   EFLQYLKDSA   GYEFLWRYGY 540
RTRPEHTPLN   DGWTACGGAV   TSVSNPHIHP   MGVIVDSDLR   YLARVTGDRY   YADRAADSAA 600
WMRQCLELYP   NVTGYGRYGV   LSERWCPSDG   LDTERFSDGR   PYSSWFSHNL   WASACVLEAA 660
CELALEEKEK   KHG 673
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-U7Q602-F1-model_v4 16 673 40 740 0.6259 0.7532
AF-Q59XS8-F1-model_v4 27 667 20 412 0.5815 0.7602
AF-P32140-F1-model_v4 251 673 9 413 0.5773 0.736
AF-Q8ZKT7-F1-model_v4 251 673 9 413 0.5773 0.736
AF-X8FM74-F1-model_v4 96 673 3 657 0.4666 0.5479
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A268K8D9 GH182 19 671 10 671 0.8665 0.9018
WHP16390.1 GH182 18 671 2 670 0.8642 0.8982
AF-A0A6M4MIA1-F1-model_v4 GH182 10 668 1 663 0.8172 0.8431
AF-A0A4Y1VDV5-F1-model_v4 GH182 24 669 8 662 0.8117 0.8527
AF-A0A6H0KIQ8-F1-model_v4 GH182 22 669 19 674 0.8109 0.8546
AF-A0A109W1T4-F1-model_v4 GH182 23 669 11 654 0.8103 0.848
AF-D5EUP3-F1-model_v4 GH182 24 668 15 665 0.8103 0.8539
AF-C9KR64-F1-model_v4 GH182 24 669 17 674 0.8103 0.8562
AF-A0A139KUB7-F1-model_v4 GH182 23 669 19 674 0.8101 0.8549
AF-D6CY91-F1-model_v4 GH182 23 669 19 674 0.8096 0.8543
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A268K8D9 GH182 19 671 10 671 0.8665 0.9018
WHP16390.1 GH182 18 671 2 670 0.8642 0.8982
A0A255SPN4 GH182 24 669 16 662 0.8073 0.8478
A0A9E8YN59 GH182 19 667 15 661 0.8045 0.845
UJH67547.1 GH182 21 667 23 666 0.7955 0.8424
A0A139L1L8 GH182 24 669 44 700 0.7933 0.8541
A0A6I6K1P7 GH182 19 671 28 676 0.7838 0.8264
A0A2S0VPZ6 GH182 18 673 40 721 0.7803 0.8377
A0A1U9NH28 GH182 19 671 33 680 0.7791 0.8245
A0A975CTD4 GH43_27 23 672 1 784 0.6817 0.9037
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
4c1s-assembly2.cif.gz_B 253 671 1 375 0.613 0.7945
5zhb-assembly1.cif.gz_A 250 669 3 380 0.6032 0.7823
5zhb-assembly2.cif.gz_B 250 669 3 379 0.6029 0.7827
5x32-assembly1.cif.gz_A 248 670 1 380 0.5979 0.7721
3wkf-assembly1.cif.gz_A 250 673 12 406 0.5949 0.7693
3vw5-assembly3.cif.gz_C 250 670 1 388 0.5921 0.7597
4z4l-assembly1.cif.gz_A 250 670 7 392 0.5893 0.7628
7ag4-assembly1.cif.gz_E-2 236 672 1 417 0.5863 0.7321
5nok-assembly2.cif.gz_B 12 669 9 669 0.5863 0.6137
8h1l-assembly1.cif.gz_A 250 673 8 417 0.5827 0.7395
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P32140-F1-model_v4 251 673 9 413 0.5773 0.736
AF-Q8ZKT7-F1-model_v4 251 673 9 413 0.5773 0.736
Download Full SwissProt Results