PROTEIN: HRGMv2_4558_38_12
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Protein File & Metadata
Source:
HRGMv2_4558_38_12.pdb
Genome ID:
Protein ID:
HRGMv2_4558_38_12
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Protein Sequence
MNAVILMLAV TACYTICSLN DKYAAAKANL SGDEFTFLMC SSMSVFLAVS LPFQQLSFSF 60 EWQSVLAVLL VVVCKMLEFQ MSARVLKQIS AFELKAWLGI TLFASYFTDI LFGSELSINK 120 LICIFATAAG LVFVARSSKG GGVNYKQIIL PLVLYLVSKY GYGLVIKSFS SYVSSTMQLL 180 PAMVIISLIM LPRVHIRELI KNNRSGVVKV VLARIPNTLG MLLENVVISI SLANYSFIQP 240 MILVTLFIIG LIRREKRSRF NLIGSIICIV GIVAFQLA 278
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71356-F1-model_v4 | 1 | 278 | 2 | 299 | 0.823 |
0.8821 |
| AF-Q2G1P2-F1-model_v4 | 1 | 278 | 4 | 287 | 0.8193 |
0.8633 |
| AF-Q9HYN8-F1-model_v4 | 1 | 278 | 6 | 289 | 0.8178 |
0.8616 |
| AF-Q9I0D0-F1-model_v4 | 1 | 278 | 7 | 285 | 0.8091 |
0.847 |
| AF-A0A0H3GNU2-F1-model_v4 | 1 | 278 | 6 | 283 | 0.8088 |
0.8478 |
| AF-K0F5D2-F1-model_v4 | 1 | 278 | 8 | 291 | 0.8062 |
0.8724 |
| AF-A0A0H3GK88-F1-model_v4 | 1 | 278 | 5 | 289 | 0.8036 |
0.8489 |
| AF-P0ABT8-F1-model_v4 | 1 | 278 | 8 | 291 | 0.7983 |
0.8524 |
| AF-P14182-F1-model_v4 | 1 | 278 | 1 | 287 | 0.798 |
0.8454 |
| AF-Q9I5Z7-F1-model_v4 | 1 | 277 | 1 | 276 | 0.7973 |
0.8302 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WJH36882.1 | GH36 | 1 | 278 | 376 | 665 | 0.5834 |
0.8394 |
| AF-A0A3P6AF83-F1-model_v4 | GH28 | 1 | 278 | 449 | 766 | 0.5583 |
0.8341 |
| AF-A0A7H8KSK8-F1-model_v4 | GT51 | 1 | 278 | 817 | 1110 | 0.5015 |
0.8122 |
| AF-A0A4D6KI88-F1-model_v4 | GH1 | 1 | 278 | 96 | 413 | 0.4859 |
0.762 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WJH36882.1 | GH36 | 1 | 278 | 376 | 665 | 0.5834 |
0.8394 |
| A0A3P6AF83 | GH28 | 1 | 278 | 449 | 766 | 0.5583 |
0.8341 |
| A0A7H8KSK8 | GT51 | 1 | 278 | 817 | 1110 | 0.5015 |
0.8122 |
| A0A4D6KI88 | GH1 | 1 | 278 | 96 | 413 | 0.4859 |
0.762 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5ogk-assembly1.cif.gz_B | 1 | 278 | 1 | 289 | 0.7988 |
0.8488 |
| 5ogk-assembly1.cif.gz_A | 1 | 278 | 1 | 284 | 0.7933 |
0.8369 |
| 6qsk-assembly2.cif.gz_G-2 | 1 | 278 | 2 | 288 | 0.7923 |
0.8411 |
| 5ogk-assembly2.cif.gz_C | 1 | 278 | 2 | 286 | 0.7895 |
0.8358 |
| 5oge-assembly3.cif.gz_H-2 | 1 | 278 | 3 | 291 | 0.7892 |
0.842 |
| 6qsk-assembly1.cif.gz_A | 1 | 278 | 1 | 284 | 0.788 |
0.832 |
| 5oge-assembly2.cif.gz_B | 1 | 278 | 3 | 291 | 0.7879 |
0.8408 |
| 5oge-assembly1.cif.gz_E | 1 | 278 | 3 | 296 | 0.7875 |
0.8462 |
| 5oge-assembly3.cif.gz_C | 1 | 278 | 5 | 294 | 0.7869 |
0.8436 |
| 5oge-assembly4.cif.gz_D | 1 | 278 | 5 | 295 | 0.7866 |
0.8445 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71356-F1-model_v4 | 1 | 278 | 2 | 299 | 0.823 |
0.8821 |
| AF-F8JJ22-F1-model_v4 | 1 | 278 | 4 | 283 | 0.8156 |
0.8655 |
| AF-O34416-F1-model_v4 | 1 | 278 | 1 | 286 | 0.8087 |
0.8538 |
| AF-O29740-F1-model_v4 | 1 | 278 | 2 | 286 | 0.8072 |
0.8501 |
| AF-P0ABT8-F1-model_v4 | 1 | 278 | 8 | 291 | 0.7983 |
0.8524 |
| AF-P14182-F1-model_v4 | 1 | 278 | 1 | 287 | 0.798 |
0.8454 |
| AF-P0ABT9-F1-model_v4 | 1 | 278 | 8 | 291 | 0.7974 |
0.8517 |
| AF-O32256-F1-model_v4 | 1 | 278 | 4 | 288 | 0.7965 |
0.8564 |
| AF-P96680-F1-model_v4 | 1 | 278 | 4 | 286 | 0.7962 |
0.8584 |
| AF-P96668-F1-model_v4 | 1 | 278 | 3 | 285 | 0.7933 |
0.8353 |