PROTEIN: HRGMv2_4553_54_8
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Protein File & Metadata
Source:
HRGMv2_4553_54_8.pdb
Genome ID:
Protein ID:
HRGMv2_4553_54_8
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Protein Sequence
MEFFKNIGKI EYKGKDSTDP LSFKYYNPDE VINGKKMRDH LKFALSWWHT MGGDGTDMFG 60 CGTTDKSWGQ TDPAARAKAK VDAAKEIMDK LSIDYYCFHD RDLSPEYGSL KETNAQLDIV 120 TDYMKTAMGD KKCLWGTAKC FDHPRFMHGA GTSPSADVFA FSAAQIKKAL DSTVKLGGNG 180 YVFWGGREGY ETLLNTNMGL ELDNMARLMK MAVEYGRSIG FTGDFYIEPK PKEPTKHQYD 240 FDTATVLGFL RKYGLDKDFK MNIEANHATL AQHTFQHELR VARDNGVFGS IDANQGDPLL 300 GWDTDQFPTN IYDTTMCMYE VIKAGGFTNG GLNFDAKARR GSFTPEDIFY SYIAGMDAFA 360 LGFRAALKLI EDGRIDKFTD DRYASWNTGI GADIIAGKAD FAALEKYALE KGEVTASLSS 420 GRQEMLESIV NNVLFSL 437
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P44398-F1-model_v4 | 1 | 436 | 2 | 439 | 0.9701 |
0.9806 |
| AF-P00944-F1-model_v4 | 1 | 437 | 2 | 440 | 0.9672 |
0.9771 |
| AF-A0A0H3H006-F1-model_v4 | 1 | 437 | 2 | 440 | 0.9667 |
0.9767 |
| AF-Q8ZL90-F1-model_v4 | 1 | 437 | 1 | 440 | 0.9665 |
0.9765 |
| AF-A0A0H3GR15-F1-model_v4 | 1 | 436 | 2 | 439 | 0.9664 |
0.9774 |
| AF-Q9FKK7-F1-model_v4 | 1 | 434 | 43 | 477 | 0.9295 |
0.9817 |
| AF-I1MSU1-F1-model_v4 | 1 | 434 | 46 | 480 | 0.9243 |
0.9794 |
| AF-Q8H3Q7-F1-model_v4 | 1 | 434 | 45 | 479 | 0.9234 |
0.9777 |
| AF-A0A1D6F3V1-F1-model_v4 | 1 | 434 | 48 | 493 | 0.9137 |
0.9802 |
| AF-A0A1D6ING2-F1-model_v4 | 1 | 434 | 50 | 494 | 0.9086 |
0.9761 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-C6XT41-F1-model_v4 | GH20 | 32 | 429 | 616 | 905 | 0.4201 |
0.8306 |
| A0A6G7X9E9 | GH33 , GH78 | 1 | 367 | 875 | 1535 | 0.3045 |
0.5536 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| C6XT41 | GH20 | 32 | 429 | 616 | 905 | 0.4201 |
0.8306 |
| A0A6G7X9E9 | GH33 , GH78 | 1 | 367 | 875 | 1535 | 0.3045 |
0.5536 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1a0c-assembly1.cif.gz_A | 1 | 436 | 1 | 437 | 0.9734 |
0.9812 |
| 1a0d-assembly1.cif.gz_A | 2 | 437 | 1 | 436 | 0.9733 |
0.9811 |
| 1a0e-assembly1.cif.gz_A | 1 | 437 | 1 | 439 | 0.9709 |
0.9827 |
| 4xkm-assembly2.cif.gz_E | 1 | 434 | 1 | 435 | 0.9657 |
0.9765 |
| 6t8f-assembly1.cif.gz_D | 1 | 434 | 2 | 436 | 0.9646 |
0.9765 |
| 5nh4-assembly1.cif.gz_C | 1 | 434 | 2 | 436 | 0.9639 |
0.9759 |
| 6int-assembly1.cif.gz_B | 4 | 437 | 1 | 412 | 0.9419 |
0.9755 |
| 1bxc-assembly1.cif.gz_A | 14 | 437 | 1 | 387 | 0.8446 |
0.9082 |
| 1bxb-assembly1.cif.gz_D | 14 | 437 | 1 | 387 | 0.8444 |
0.908 |
| 1muw-assembly1.cif.gz_A | 24 | 437 | 1 | 386 | 0.8415 |
0.9053 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9S306-F1-model_v4 | 1 | 437 | 1 | 438 | 0.9933 |
0.9977 |
| AF-B9MPG8-F1-model_v4 | 1 | 437 | 1 | 438 | 0.9813 |
0.9869 |
| AF-Q9KGU2-F1-model_v4 | 1 | 437 | 1 | 438 | 0.9809 |
0.9865 |
| AF-P19148-F1-model_v4 | 1 | 437 | 2 | 439 | 0.9806 |
0.9872 |
| AF-B0K1L3-F1-model_v4 | 1 | 437 | 1 | 438 | 0.9801 |
0.9859 |
| AF-P22842-F1-model_v4 | 1 | 437 | 1 | 438 | 0.9799 |
0.9857 |
| AF-Q7UVG2-F1-model_v4 | 1 | 437 | 1 | 439 | 0.9784 |
0.9857 |
| AF-Q5WKJ3-F1-model_v4 | 1 | 437 | 1 | 437 | 0.9772 |
0.9844 |
| AF-P29441-F1-model_v4 | 1 | 437 | 2 | 439 | 0.977 |
0.9842 |
| AF-P30435-F1-model_v4 | 1 | 437 | 1 | 439 | 0.9768 |
0.984 |