PROTEIN: HRGMv2_4553_54_6
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_4553_54_6.pdb
Genome ID:
Protein ID:
HRGMv2_4553_54_6
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MSVKCYETEY ENFGKCQCLE NGRIKLIATT DVGPRIVFFG FIDGRNVLFE DVDRNFYEMN 60 NGYGVWYAYG GHRIWCAPEE MPETYLPDNS KVEAFFDNGT LTLRPARTKF DKQFELVITM 120 GDDNTVTIDN RITNCSDKPS RFSPWSVTGL AAGGTEIIPL CGDEKGFLPN RTMALWSYSA 180 INDKRFTLTD KYALLRQDAK SDKPFKTGFN VTGNHIIYVN GKNILKVSFD DYSPVEYPDF 240 CCNFETYTNN LFLECEILGE LRAYKSGETA SLKETWELTS SDELPEKVVD EIVSKI 296
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-C7G007-F1-model_v4 | 3 | 296 | 1 | 349 | 0.8426 |
0.9399 |
| AF-K7LNG1-F1-model_v4 | 2 | 279 | 8 | 257 | 0.6931 |
0.7823 |
| AF-A0A1P8B8W1-F1-model_v4 | 1 | 282 | 11 | 312 | 0.6796 |
0.7526 |
| AF-B4FB29-F1-model_v4 | 2 | 288 | 1 | 294 | 0.6754 |
0.7272 |
| AF-Q9FJY6-F1-model_v4 | 1 | 279 | 32 | 307 | 0.675 |
0.7532 |
| AF-K7KYT6-F1-model_v4 | 1 | 296 | 4 | 304 | 0.6738 |
0.7161 |
| AF-Q9M308-F1-model_v4 | 1 | 296 | 6 | 311 | 0.6709 |
0.7163 |
| AF-K7N093-F1-model_v4 | 1 | 296 | 6 | 314 | 0.6702 |
0.716 |
| AF-K7L853-F1-model_v4 | 1 | 295 | 4 | 306 | 0.6701 |
0.7152 |
| AF-A0A0H3GRS1-F1-model_v4 | 13 | 281 | 1 | 277 | 0.669 |
0.7303 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2K2FIH3 | PL17 | 3 | 281 | 63 | 302 | 0.6012 |
0.7562 |
| AF-A0A447RTW9-F1-model_v4 | GH36 | 7 | 292 | 1 | 272 | 0.5406 |
0.6949 |
| AF-A0A4D6LT20-F1-model_v4 | GT31 | 1 | 282 | 395 | 687 | 0.5028 |
0.7401 |
| AF-K4Q6F3-F1-model_v4 | GH36 | 3 | 296 | 1 | 561 | 0.4769 |
0.6875 |
| AF-C9Y4L5-F1-model_v4 | GH36 | 2 | 296 | 1 | 538 | 0.472 |
0.6779 |
| QWC98984.1 | GH0 | 1 | 280 | 380 | 649 | 0.4665 |
0.7023 |
| AF-A0A1H2G5K8-F1-model_v4 | GH57 | 1 | 283 | 416 | 706 | 0.4663 |
0.6905 |
| AF-G0ELK7-F1-model_v4 | GH57 | 1 | 281 | 402 | 706 | 0.465 |
0.693 |
| AF-D5U4R4-F1-model_v4 | GH57 | 1 | 288 | 402 | 706 | 0.4649 |
0.6775 |
| BDZ47805.1 | GH36 | 12 | 296 | 8 | 629 | 0.4635 |
0.6777 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2K2FIH3 | PL17 | 3 | 281 | 63 | 302 | 0.6012 |
0.7562 |
| A0A5B9PRI9 | GH117 | 8 | 296 | 342 | 716 | 0.5842 |
0.8533 |
| QUX92240.1 | PL4_4 | 1 | 296 | 20 | 299 | 0.5142 |
0.7196 |
| A0A4D6LT20 | GT31 | 1 | 282 | 395 | 687 | 0.5028 |
0.7401 |
| A0A345CW39 | PL4 | 1 | 295 | 2 | 266 | 0.5012 |
0.7243 |
| A0A2I5TBU8 | PL4_4 | 1 | 295 | 30 | 302 | 0.5008 |
0.7221 |
| F8F2N4 | GH57 | 1 | 281 | 353 | 613 | 0.4964 |
0.758 |
| C6CIE9 | PL4_4 | 1 | 296 | 59 | 330 | 0.4926 |
0.7212 |
| F2NMK1 | GH57 | 1 | 281 | 366 | 632 | 0.4909 |
0.7415 |
| QIS40534.1 | GH36 | 11 | 296 | 16 | 515 | 0.4906 |
0.6702 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3nre-assembly4.cif.gz_D | 13 | 281 | 1 | 291 | 0.6655 |
0.743 |
| 3k25-assembly2.cif.gz_B | 11 | 281 | 8 | 289 | 0.6652 |
0.7383 |
| 1jov-assembly1.cif.gz_A | 4 | 279 | 11 | 269 | 0.6643 |
0.742 |
| 3ty1-assembly1.cif.gz_C | 1 | 296 | 31 | 366 | 0.661 |
0.7627 |
| 3q1n-assembly1.cif.gz_A | 15 | 279 | 1 | 294 | 0.6607 |
0.7523 |
| 3os7-assembly4.cif.gz_D | 1 | 288 | 1 | 338 | 0.6568 |
0.7369 |
| 2ciq-assembly1.cif.gz_A | 4 | 278 | 1 | 287 | 0.6564 |
0.7152 |
| 2htb-assembly4.cif.gz_D | 3 | 281 | 17 | 296 | 0.6546 |
0.7154 |
| 3dcd-assembly2.cif.gz_B | 15 | 283 | 1 | 296 | 0.6542 |
0.7404 |
| 3imh-assembly1.cif.gz_A | 2 | 288 | 1 | 332 | 0.6439 |
0.7184 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P39840-F1-model_v4 | 1 | 283 | 1 | 325 | 0.673 |
0.7541 |
| AF-P76584-F1-model_v4 | 14 | 281 | 1 | 290 | 0.6659 |
0.7446 |
| AF-P39173-F1-model_v4 | 3 | 288 | 15 | 294 | 0.6535 |
0.7093 |
| AF-Q8ZPV9-F1-model_v4 | 3 | 281 | 15 | 294 | 0.6519 |
0.7104 |
| AF-Q40784-F1-model_v4 | 2 | 288 | 21 | 321 | 0.6495 |
0.7233 |
| AF-Q94AQ8-F1-model_v4 | 3 | 281 | 39 | 348 | 0.6178 |
0.7228 |
| AF-Q9C503-F1-model_v4 | 2 | 281 | 71 | 354 | 0.6026 |
0.7071 |
| AF-Q8RJP2-F1-model_v4 | 1 | 296 | 27 | 301 | 0.5036 |
0.7187 |
| AF-A0LE49-F1-model_v4 | 9 | 295 | 79 | 352 | 0.4994 |
0.7058 |
| AF-B5EGX9-F1-model_v4 | 13 | 296 | 73 | 336 | 0.4992 |
0.7222 |