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PROTEIN: HRGMv2_4550_2_144

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Protein File & Metadata
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Source:
HRGMv2_4550_2_144.pdb
Genome ID:
HRGMv2_4550
Protein ID:
HRGMv2_4550_2_144

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Detailed structural information will appear here after analysis...

Protein Sequence 
MNPYRVSPEE   FLKNSRLPVR   VLPTEADMYE   EMAEIIVSAI   AENNGRAVVI   CPVGPIGQYP 60
VLARKINERR   ISLRDVWFLN   MDEYLDGSDR   PIPASDPLSF   HGIMERLLYS   QIAPELVMPP 120
EQRLFPEPGQ   EAQIDRLLEE   LGGADCCLTG   VGINGHIAFN   EPPAAEEPVS   DEEFRSCGTR 180
CLDISRETIV   NNGAHKIHGA   LDIFPRRCIT   LGMKQLLAAR   NLKIYLYCDW   QWGIMRKIAL 240
EEPSRFAPAS   FLQLHPNSEM   VITEELLHMT   LDH 273
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q2G0K8-F1-model_v4 17 270 1 242 0.8314 0.9126
AF-Q04802-F1-model_v4 17 270 1 245 0.827 0.8932
AF-A0A132YZ81-F1-model_v4 17 270 1 233 0.8229 0.9027
AF-P42912-F1-model_v4 7 266 8 251 0.8147 0.8883
AF-Q8DPA1-F1-model_v4 17 270 1 233 0.8141 0.8978
AF-Q8ZQX7-F1-model_v4 17 270 1 247 0.8126 0.8987
AF-Q32IQ2-F1-model_v4 17 270 1 247 0.8123 0.8984
AF-A0A0H3GK04-F1-model_v4 17 270 1 247 0.8122 0.8983
AF-A0A3Q0KJ37-F1-model_v4 17 270 1 247 0.812 0.8823
AF-Q9XVJ2-F1-model_v4 17 270 1 246 0.8114 0.9024
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A5Z828 GH20 17 257 1 280 0.6021 0.7347
AF-A0A0H4PAS9-F1-model_v4 CE9 17 272 1 246 0.5614 0.8698
AF-G0IWQ0-F1-model_v4 CE9 17 272 1 246 0.5602 0.8667
AF-A0A1W2H3T6-F1-model_v4 CE9 17 270 1 243 0.5575 0.873
AF-G0ELA3-F1-model_v4 CE9 17 270 1 239 0.5485 0.885
AF-D5U6N5-F1-model_v4 CE9 17 270 1 239 0.5482 0.8845
AF-D8I9Y7-F1-model_v4 CE9 17 270 1 239 0.5482 0.8844
AF-J9UUU6-F1-model_v4 CE9 17 270 1 239 0.5481 0.8843
AF-A0A3B6VCF9-F1-model_v4 CE9 17 270 1 239 0.5481 0.8842
AF-K0JLB5-F1-model_v4 CE9 17 270 1 239 0.5479 0.8839
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A5Z828 GH20 17 257 1 280 0.6021 0.7347
A0A0H4PAS9 CE9 17 272 1 246 0.5614 0.8698
A0A3B6VIU1 CE9 17 270 1 239 0.5472 0.8828
U5ECU6 CE9 16 270 391 631 0.5412 0.8635
A0A871RFD9 GH3 1 270 971 1250 0.5054 0.8454
A0A875S4F4 GH3 1 271 735 1287 0.4964 0.8324
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
2bkv-assembly1.cif.gz_A 17 270 1 241 0.8433 0.9105
5hj5-assembly2.cif.gz_B 17 270 1 247 0.8099 0.8975
7lqn-assembly2.cif.gz_I 16 270 1 248 0.7984 0.8751
7lqm-assembly2.cif.gz_D 17 270 1 247 0.7974 0.8854
1ne7-assembly1.cif.gz_E 17 270 1 247 0.7943 0.8919
7lqm-assembly1.cif.gz_B 17 270 1 245 0.793 0.8842
7lqm-assembly1.cif.gz_A 17 270 1 243 0.7928 0.8801
1cd5-assembly1.cif.gz_A 17 270 1 247 0.7916 0.8784
3hn6-assembly1.cif.gz_D 16 270 3 250 0.7855 0.8747
6nbg-assembly1.cif.gz_E 15 270 1 239 0.7827 0.8578
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q4L9T8-F1-model_v4 17 270 1 242 0.863 0.9267
AF-Q8CTR3-F1-model_v4 17 270 1 242 0.855 0.9208
AF-Q97MK9-F1-model_v4 17 270 1 241 0.85 0.9163
AF-Q49VB6-F1-model_v4 17 270 1 242 0.8498 0.9145
AF-Q890L6-F1-model_v4 17 270 1 241 0.848 0.9145
AF-Q5HRH8-F1-model_v4 17 270 1 242 0.8462 0.9127
AF-A6M241-F1-model_v4 17 271 1 242 0.8458 0.9109
AF-A0PYW1-F1-model_v4 17 270 1 241 0.8439 0.9108
AF-C3L2N7-F1-model_v4 17 270 1 241 0.8438 0.9154
AF-C1FV12-F1-model_v4 17 270 1 241 0.8435 0.9152
Download Full SwissProt Results