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PROTEIN: HRGMv2_4550_17_5

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_4550_17_5.pdb
Genome ID:
HRGMv2_4550
Protein ID:
HRGMv2_4550_17_5

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKKRMLCALL   TAIMAASCLA   GCGDAGKSSG   TGSSQTASSG   ESSLAPESSA   ESDPYAEHLS 60
FEIFTIDGSE   EMLKYPLVAE   ACEKFNMDFS   IQLVAWDNWD   DVTRTLAATD   SFPEVIAWYN 120
LNYAEYVEWA   QEGVFKAIPN   DLSAYPNLEA   LTEKYTIFDK   LMVDGDLYAF   PKIKNNNPYN 180
EYDSYMFAYR   RDWANAMGLN   YAPVQDITWD   EFKDYLRKVK   TEDPGKLGDK   LVPFDLEHGG 240
NSWCGLARKW   NPYIAGYKMV   DGQYTWGAPD   ATSMDAILEI   KELYDAGLLS   PDSYTDANNA 300
GKERFMAGRS   AVIYSNLGPS   ILQNTVNQMT   ANIDGFKEED   LGLFTIKMAD   GKYAVSQMDE 360
WWGSFAFDNE   CRDEVIDRWL   AVGNWLLENE   QVEKYAYGVE   GEDWTRGADG   KVTLNYTAEQ 420
ASAGGDKEYI   TNQRPFQKFF   ILEGLDIFLE   GNPNANSYVI   NDLFKTNMET   WATNPNYTPS 480
NYDLNYFSSP   EKDAFASILS   GTSDDFIRAV   ISDDPEGIWN   QFVEENKAQA   EKACAEINEV 540
FGK 543
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133CZN8-F1-model_v4 14 543 13 501 0.7259 0.7919
AF-A0A133D019-F1-model_v4 1 543 12 481 0.7036 0.7818
AF-A0A133CPC5-F1-model_v4 53 536 29 423 0.6355 0.7743
AF-A0A133CDW9-F1-model_v4 15 539 28 444 0.6354 0.7557
AF-P76042-F1-model_v4 48 536 19 430 0.6297 0.7464
AF-A0A0H3GX53-F1-model_v4 53 540 20 428 0.6271 0.7469
AF-K0F8J3-F1-model_v4 15 537 18 435 0.6236 0.7354
AF-Q7AQ51-F1-model_v4 15 537 23 445 0.6214 0.7314
AF-K0EUI4-F1-model_v4 59 539 20 438 0.6212 0.7321
AF-Q9CBN6-F1-model_v4 56 536 36 445 0.6205 0.7509
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 52 543 40 505 0.731 0.8346
AF-K8EJG7-F1-model_v4 CBM50 , CE4 57 537 33 417 0.6114 0.7575
AF-A0A7U1BNH7-F1-model_v4 GH10 56 543 27 745 0.4956 0.6383
AF-A0A1Q2TKJ3-F1-model_v4 GH49 1 537 194 797 0.4932 0.6004
A0A9Q8PNJ5 GH4 8 536 18 866 0.4914 0.6234
UJP10085.1 GH154 1 513 402 1166 0.365 0.5557
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 52 543 40 505 0.731 0.8346
K8EJG7 CBM50 , CE4 57 537 33 417 0.6114 0.7575
A0A7U1BNH7 GH10 56 543 27 745 0.4956 0.6383
A0A1Q2TKJ3 GH49 1 537 194 797 0.4932 0.6004
A0A9Q8PNJ5 GH4 8 536 18 866 0.4914 0.6234
UJP10085.1 GH154 1 513 402 1166 0.365 0.5557
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5xs8-assembly1.cif.gz_A 58 542 1 474 0.7364 0.8043
6fth-assembly1.cif.gz_A 55 543 1 495 0.7357 0.7965
3omb-assembly1.cif.gz_A 55 543 5 503 0.7249 0.7905
4tqu-assembly1.cif.gz_Q 51 543 3 488 0.724 0.7878
5h6u-assembly1.cif.gz_A 53 543 1 487 0.7228 0.7816
3vlw-assembly2.cif.gz_B 51 543 2 487 0.7203 0.7823
6jhx-assembly2.cif.gz_B 51 543 3 483 0.7192 0.7836
5g62-assembly2.cif.gz_B 59 543 1 485 0.7171 0.7795
5suo-assembly1.cif.gz_A 58 543 1 448 0.7169 0.8036
5g5y-assembly1.cif.gz_A 55 543 1 487 0.7015 0.765
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P37966-F1-model_v4 52 543 29 502 0.7489 0.8378
AF-Q795R2-F1-model_v4 50 543 34 498 0.705 0.8031
AF-A0A0H2URD6-F1-model_v4 50 543 39 531 0.6944 0.7762
AF-Q8FVS7-F1-model_v4 56 537 22 411 0.6608 0.802
AF-Q578M8-F1-model_v4 56 537 22 411 0.6598 0.8016
AF-Q2YKZ9-F1-model_v4 56 537 22 411 0.6586 0.7996
AF-Q7LYW7-F1-model_v4 40 539 13 450 0.6503 0.7457
AF-A0A0H2UMY0-F1-model_v4 6 543 17 485 0.6305 0.7118
AF-P76042-F1-model_v4 48 536 19 430 0.6297 0.7464
AF-A0QXD9-F1-model_v4 1 537 34 477 0.6296 0.7323
Download Full SwissProt Results