PROTEIN: HRGMv2_4539_23_25
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Protein File & Metadata
Source:
HRGMv2_4539_23_25.pdb
Genome ID:
Protein ID:
HRGMv2_4539_23_25
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Protein Sequence
MKKSNLYGET IALCKPVRLS ELSAEEMRSF HCGNDVIDEY IKEHAHKDAQ AVTFAIRDKA 60 DGSVICCYSL SCSGFVVESH HHFTIYPAVE IKMFAMDTAY QHVPYSSHQD DGTLSDFLFG 120 SVISRIYEFT EKECGADHII LYAVLKAENF YLKNGFSRFE EFMLQSKSRF LDGCIPMYMS 180 L 181
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q326V1-F1-model_v4 | 5 | 181 | 1 | 160 | 0.7713 |
0.84 |
| AF-Q8ZL98-F1-model_v4 | 6 | 181 | 1 | 159 | 0.7648 |
0.8398 |
| AF-Q32AN3-F1-model_v4 | 10 | 181 | 1 | 158 | 0.7523 |
0.8326 |
| AF-Q59DX8-F1-model_v4 | 9 | 181 | 18 | 178 | 0.6366 |
0.7358 |
| AF-A0A1C1CSS3-F1-model_v4 | 7 | 181 | 1 | 216 | 0.5809 |
0.6782 |
| AF-C1H6B4-F1-model_v4 | 4 | 181 | 1 | 215 | 0.5657 |
0.6526 |
| AF-Q38AU6-F1-model_v4 | 1 | 181 | 48 | 319 | 0.5388 |
0.7222 |
| AF-C0NVE2-F1-model_v4 | 5 | 181 | 16 | 367 | 0.4769 |
0.6758 |
| AF-K7MY73-F1-model_v4 | 4 | 181 | 11 | 244 | 0.4407 |
0.7073 |
| AF-A0A0N4U3Q8-F1-model_v4 | 6 | 181 | 374 | 545 | 0.4184 |
0.715 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7ak8-assembly1.cif.gz_A | 11 | 181 | 1 | 147 | 0.7665 |
0.8758 |
| 7ak8-assembly1.cif.gz_B | 6 | 181 | 1 | 149 | 0.7632 |
0.8674 |
| 7ak9-assembly1.cif.gz_B | 7 | 181 | 1 | 150 | 0.7618 |
0.8895 |
| 7ak9-assembly1.cif.gz_A | 7 | 181 | 1 | 149 | 0.761 |
0.8912 |
| 7f36-assembly1.cif.gz_D | 6 | 181 | 1 | 158 | 0.7599 |
0.8356 |
| 7f37-assembly1.cif.gz_B | 11 | 181 | 1 | 154 | 0.7595 |
0.8529 |
| 6ajn-assembly1.cif.gz_B | 10 | 181 | 1 | 149 | 0.7534 |
0.8708 |
| 7f37-assembly1.cif.gz_A | 12 | 181 | 1 | 157 | 0.7516 |
0.838 |
| 6gtr-assembly1.cif.gz_A | 11 | 181 | 1 | 151 | 0.7506 |
0.866 |
| 6gtq-assembly1.cif.gz_A | 11 | 181 | 1 | 151 | 0.7498 |
0.8651 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P55366-F1-model_v4 | 7 | 181 | 4 | 173 | 0.727 |
0.7925 |
| AF-Q59DX8-F1-model_v4 | 9 | 181 | 18 | 178 | 0.6366 |
0.7358 |
| AF-Q8VVF0-F1-model_v4 | 7 | 181 | 1 | 176 | 0.6262 |
0.7032 |
| AF-Q53252-F1-model_v4 | 6 | 181 | 1 | 176 | 0.6224 |
0.6962 |
| AF-P50347-F1-model_v4 | 4 | 181 | 12 | 190 | 0.6088 |
0.6942 |
| AF-Q9AMZ0-F1-model_v4 | 4 | 181 | 12 | 190 | 0.5986 |
0.6828 |
| AF-Q07739-F1-model_v4 | 4 | 181 | 28 | 206 | 0.597 |
0.6989 |
| AF-Q9F0C9-F1-model_v4 | 5 | 181 | 17 | 194 | 0.5915 |
0.6836 |
| AF-Q9JHD2-F1-model_v4 | 1 | 181 | 114 | 648 | 0.4121 |
0.6893 |