PROTEIN: HRGMv2_4525_19_16
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Protein File & Metadata
Source:
HRGMv2_4525_19_16.pdb
Genome ID:
Protein ID:
HRGMv2_4525_19_16
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Protein Sequence
MELQWRDCRV QWDGQELVLG NSRMESRWIC GGEGMDLAAF RSCEGEFCWQ GTGGETPSLP 60 PPVLRHRVMS SPWQGSEERL ELELRWPGRR QILELWPEGD FVACRRRWLG GRDETAPSLS 120 AGEGGVERDD SPENRAGEDV ICAAALPAVH LDWQCISLRE QSDLRDALVL EQSAPVYPRE 180 DLRLQGTALL LRTRPEGEVL AAVRAAPACG APGGFRLAGG RLEVWGSSPM ETGHAAGEGC 240 RCFIGAVRDA ESLWRSWRRQ YRMLWKAPWQ SRGRMLSNTW GDRSRDSRVC ASFVADEIRL 300 AARLGLDCVQ IDDGWQKGRT KNSASPQGGA WGSYYDLDLD FWTPHPQRFP NGLAPLVRLA 360 QSQGVELGLW FSPDSSGEFR HWQRDAETLL GLWRQGIRVF KLDGVNLPSD RALRRYQKLL 420 ERVCRESGGQ VDLQQDITAQ RRMGMLLGCQ YGSLFVENRY TDFGNYYPHR TLRNLWSLSR 480 FVPAQRLLME LPNPARNPQN YENDPLAPGR WQLEWLLASV ICAQPLFWME LSGLSNAQRF 540 QLAEAVERMK PWRQILWECD IQPVGSMPDG FSVCGFFCSH PAGGGLVLAL REMGEQDTLQ 600 LDKPVKLEKL LGGPARCGES PRSYIQLLSP GSFGLFRWRA 640
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8CWP3-F1-model_v4 | 8 | 640 | 1 | 720 | 0.7346 |
0.797 |
| AF-A0A132P9P9-F1-model_v4 | 4 | 640 | 7 | 741 | 0.7225 |
0.7901 |
| AF-A0A0H3GGW6-F1-model_v4 | 12 | 640 | 1 | 707 | 0.7222 |
0.7822 |
| AF-Q55B10-F1-model_v4 | 43 | 640 | 8 | 385 | 0.6108 |
0.7836 |
| AF-A0A175W6H1-F1-model_v4 | 51 | 640 | 5 | 402 | 0.6064 |
0.7596 |
| AF-Q8VXZ7-F1-model_v4 | 1 | 640 | 16 | 431 | 0.602 |
0.7568 |
| AF-Q9VL27-F1-model_v4 | 38 | 640 | 6 | 409 | 0.6017 |
0.7543 |
| AF-Q8RX86-F1-model_v4 | 4 | 640 | 20 | 395 | 0.601 |
0.7861 |
| AF-F1Q5G5-F1-model_v4 | 45 | 640 | 8 | 409 | 0.6006 |
0.7522 |
| AF-I1KB92-F1-model_v4 | 64 | 640 | 15 | 424 | 0.5994 |
0.758 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WFB36751.1 | GH0 | 7 | 638 | 1 | 663 | 0.7925 |
0.8255 |
| QYY37283.1 | GH0 | 12 | 639 | 10 | 645 | 0.778 |
0.8055 |
| AF-I0HZ79-F1-model_v4 | GH36 | 1 | 640 | 3 | 717 | 0.7679 |
0.8248 |
| AF-A0A402CR84-F1-model_v4 | GH36 | 10 | 639 | 1 | 696 | 0.753 |
0.8083 |
| A0A087DBZ9 | GH36 | 13 | 640 | 1 | 722 | 0.7504 |
0.8203 |
| A0A2W1Z638 | GH36 | 6 | 638 | 4 | 676 | 0.7488 |
0.7892 |
| AF-A0A7H0I7J1-F1-model_v4 | GH36 | 10 | 640 | 1 | 691 | 0.7464 |
0.7978 |
| AF-A0A2Z5JUK7-F1-model_v4 | GH36 | 4 | 640 | 4 | 708 | 0.7459 |
0.8003 |
| AF-A0A6H1KZ62-F1-model_v4 | GH36 | 13 | 640 | 3 | 710 | 0.7445 |
0.809 |
| AF-A0A143CCQ9-F1-model_v4 | GH36 | 2 | 640 | 1 | 704 | 0.7441 |
0.7942 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| I0HZ79 | GH36 | 1 | 640 | 3 | 717 | 0.7679 |
0.8248 |
| A0A402CR84 | GH36 | 10 | 639 | 1 | 696 | 0.753 |
0.8083 |
| A0A087DBZ9 | GH36 | 13 | 640 | 1 | 722 | 0.7504 |
0.8203 |
| A0A2W1Z638 | GH36 | 6 | 638 | 4 | 676 | 0.7488 |
0.7892 |
| D1CI33 | GH36 | 6 | 640 | 5 | 677 | 0.7481 |
0.7874 |
| E8MZQ9 | GH36 | 12 | 639 | 11 | 690 | 0.7466 |
0.8019 |
| A0A0D5NP99 | GH36 | 1 | 638 | 1 | 699 | 0.7457 |
0.7942 |
| A0A3S8VVS3 | GH36 | 4 | 640 | 1 | 706 | 0.7442 |
0.7954 |
| A0A8B4FVW2 | GH36 | 13 | 640 | 1 | 685 | 0.7412 |
0.7932 |
| WFR59213.1 | GH36 | 9 | 640 | 1 | 697 | 0.7411 |
0.7935 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6phu-assembly1.cif.gz_A | 4 | 640 | 1 | 722 | 0.7347 |
0.7935 |
| 6phw-assembly1.cif.gz_A | 7 | 640 | 1 | 721 | 0.7341 |
0.7959 |
| 2yfn-assembly1.cif.gz_A | 8 | 640 | 1 | 719 | 0.7298 |
0.7921 |
| 4fnq-assembly1.cif.gz_A | 7 | 640 | 1 | 723 | 0.7294 |
0.7922 |
| 6jhp-assembly1.cif.gz_D | 8 | 640 | 1 | 715 | 0.729 |
0.7896 |
| 2xn0-assembly1.cif.gz_A | 4 | 640 | 1 | 728 | 0.7236 |
0.785 |
| 2xn2-assembly1.cif.gz_A | 4 | 640 | 1 | 726 | 0.7231 |
0.7834 |
| 4fnu-assembly1.cif.gz_D | 15 | 640 | 1 | 718 | 0.7215 |
0.7907 |
| 4fns-assembly1.cif.gz_D | 15 | 640 | 1 | 718 | 0.7208 |
0.7896 |
| 4fnt-assembly1.cif.gz_D | 15 | 640 | 1 | 718 | 0.7202 |
0.7889 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P27756-F1-model_v4 | 8 | 640 | 1 | 720 | 0.7341 |
0.7968 |
| AF-Q0CEF5-F1-model_v4 | 2 | 640 | 2 | 724 | 0.7308 |
0.789 |
| AF-G1UB44-F1-model_v4 | 4 | 640 | 1 | 731 | 0.7286 |
0.7921 |
| AF-Q5ARP5-F1-model_v4 | 6 | 640 | 9 | 725 | 0.7271 |
0.7901 |
| AF-Q9ALJ4-F1-model_v4 | 4 | 640 | 1 | 727 | 0.7266 |
0.7886 |
| AF-P43469-F1-model_v4 | 4 | 640 | 1 | 719 | 0.725 |
0.7828 |
| AF-P43467-F1-model_v4 | 7 | 640 | 1 | 730 | 0.7244 |
0.7914 |
| AF-Q0CVH2-F1-model_v4 | 4 | 640 | 27 | 746 | 0.7224 |
0.7922 |
| AF-B8NWY6-F1-model_v4 | 4 | 640 | 30 | 750 | 0.7199 |
0.7914 |
| AF-Q2TW69-F1-model_v4 | 4 | 640 | 30 | 750 | 0.7199 |
0.7914 |