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PROTEIN: HRGMv2_4525_16_8

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_4525_16_8.pdb
Genome ID:
HRGMv2_4525
Protein ID:
HRGMv2_4525_16_8

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Detailed structural information will appear here after analysis...

Protein Sequence 
MSVSVAVITC   GPSDLLALLQ   KSPALTVEIL   HPNALTPHCL   DGFQCACVLG   GTREEPLVFP 60
AECRSVVEDF   SHSGRRVLYE   YTLSFCQNYC   ASPDSTRFLR   LVCTDAEFAG   LEDGLLLDDQ 120
CNMRCTPYYR   NNLARPILMY   KKGLSEHARQ   PLSQQERTDC   QQYGIWLETP   AVAVCSFRLC 180
NFLRARFSPM   PAWSRLVRSL   IGWLCGAPVL   EEVEFPPQYQ   TGFARSAADC   AASGIDWFSR 240
SGILVDEGKR   GVLEGLGTEI   YPDGRQKTAS   SIRTDCCGEA   ALAYLMHFLA   FGDARSLERA 300
QNLEAFVYDK   MQIRSGRFQG   MLRWTDIAWE   VCYQDDMARA   MLVTLFKALY   GLGREYLPQC 360
RMALEFLMNT   TGPDGLRPAR   TDNLNMSEED   FAALSRQNGA   FPCAHYNAFY   LACLLLYGKL 420
EKDARCLAVG   ETGMQALLQA   YPKTIREQSQ   TEELCRLLLP   FAWLYYATGK   QEYRQMLYTV 480
TRDLEKMRHP   SGAYLEWDDD   YSAACSKQEN   GECSLLARNG   DPVCDLLYSN   NWVPLGLMQA 540
YFVTEDAYFY   DLFCRHAAFL   STAQIHSQDP   RIDGAWARGF   DAEQMEVCGL   PNDVGWGPWA 600
VESGWTVAEI   CAGLLQGVLK   DKLKEFYK 628
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K0EZT0-F1-model_v4 143 624 2 400 0.5768 0.7151
AF-P32140-F1-model_v4 225 626 11 411 0.5757 0.7222
AF-Q8ZKT7-F1-model_v4 225 626 11 411 0.5754 0.7219
AF-B0S6K7-F1-model_v4 224 626 10 401 0.5752 0.7275
AF-O74556-F1-model_v4 20 628 9 396 0.5616 0.751
AF-P51606-F1-model_v4 224 624 22 407 0.5582 0.7362
AF-P51607-F1-model_v4 224 624 23 408 0.5557 0.7355
AF-P82343-F1-model_v4 224 624 23 408 0.5553 0.7345
AF-U7PHS6-F1-model_v4 220 625 20 405 0.5437 0.7442
AF-U7PLG1-F1-model_v4 55 623 15 530 0.5224 0.5916
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-D4IIK3-F1-model_v4 GH88 224 624 2 373 0.6138 0.7839
AF-A0A1W6LJG0-F1-model_v4 GH76 224 626 25 374 0.6127 0.8288
AF-A0A127V9R1-F1-model_v4 GH76 211 622 11 357 0.6119 0.8078
A0A4Q7MQQ1 GH76 223 624 21 359 0.6011 0.8162
AF-A0A5B8UVH7-F1-model_v4 GH76 223 624 22 359 0.601 0.817
AF-A0A7G7FYW7-F1-model_v4 GH76 224 628 31 383 0.6008 0.8107
AF-W0F1F9-F1-model_v4 GH76 222 624 24 361 0.599 0.8181
AF-A0A386HTK9-F1-model_v4 GH76 223 624 25 362 0.5959 0.8141
AF-A0A6G7X751-F1-model_v4 GH88 225 624 31 414 0.5919 0.7721
AF-A0A5B8VGY7-F1-model_v4 GH76 222 623 35 372 0.5885 0.8183
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A068NWE0 GH76 223 622 14 359 0.6199 0.8248
G0GBZ5 GH88 225 628 1 377 0.6192 0.7832
A0A7M2RFN4 GH88 223 627 2 371 0.6181 0.7868
W0RD84 GH88 223 625 9 384 0.6136 0.7835
A0A858RQI1 GH76 224 623 15 361 0.6133 0.83
A0A1W6LJG0 GH76 224 626 25 374 0.6127 0.8288
A0A5Q2P239 GH88 225 627 11 381 0.6101 0.7859
A0A172TDI0 GH88 224 627 12 388 0.6095 0.7812
A0A518ART4 GH76 222 624 34 387 0.6082 0.8242
A0A089JT76 GH88 224 627 10 375 0.6077 0.7868
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
4v1s-assembly1.cif.gz_A 224 624 7 358 0.6226 0.8144
2fv1-assembly2.cif.gz_B 226 628 1 377 0.6222 0.7851
5zhb-assembly2.cif.gz_B 224 622 5 379 0.6184 0.7868
5zhb-assembly1.cif.gz_A 224 622 5 380 0.6184 0.7861
3wiw-assembly1.cif.gz_A 224 623 2 367 0.6118 0.7864
3vw5-assembly3.cif.gz_C 224 622 3 387 0.6084 0.7665
7d5g-assembly1.cif.gz_A 225 621 8 389 0.6083 0.7717
8wbv-assembly1.cif.gz_A 225 621 10 391 0.6029 0.7666
4z4l-assembly1.cif.gz_A 225 622 10 392 0.6023 0.7657
3wkf-assembly1.cif.gz_A 225 625 15 404 0.6005 0.7655
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q5LH66-F1-model_v4 225 623 7 392 0.6158 0.7771
AF-P0DKY4-F1-model_v4 224 622 3 387 0.6101 0.7685
AF-E6UB41-F1-model_v4 224 622 3 387 0.61 0.7685
AF-B8DZK4-F1-model_v4 225 621 8 389 0.5977 0.7588
AF-F8WRK9-F1-model_v4 225 625 17 406 0.5961 0.7647
AF-B3XZI5-F1-model_v4 224 622 3 402 0.5955 0.7414
AF-P29954-F1-model_v4 224 625 8 387 0.5918 0.7531
AF-T2KLZ3-F1-model_v4 226 624 36 400 0.5835 0.7832
AF-P32140-F1-model_v4 225 626 11 411 0.5757 0.7222
AF-Q8ZKT7-F1-model_v4 225 626 11 411 0.5754 0.7219
Download Full SwissProt Results