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PROTEIN: HRGMv2_4519_5_26

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_4519_5_26.pdb
Genome ID:
HRGMv2_4519
Protein ID:
HRGMv2_4519_5_26

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Detailed structural information will appear here after analysis...

Protein Sequence 
MNAMTLKIVN   AEGAVLQSCT   GPGTLRLVYR   EAYRPGDCLV   LDAGAPGRFA   VVQWEDTMPP 60
ALLYAAQREL   RFRVPFGEQA   TVYSPKSFTG   ACQVLRARPA   RPEEVAARRN   LAFNPYDQHE 120
NEGACPHAAA   NVETRGEAVF   AARNAIDGVY   ENAGHGVWPF   QSWGINRDPE   AALTLSFGRP 180
VTVDELRLTL   RADFPHDSWW   TAATVCFSDG   SREVLPLQKS   GEPQAFAIAP   RTVTGLVLCE 240
LKKADDPSPF   PALSQIEAWG   TEAR 264
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q3TV70-F1-model_v4 107 264 1 140 0.6485 0.8641
AF-Q86WQ0-F1-model_v4 107 263 1 139 0.6411 0.8569
AF-Q1ED21-F1-model_v4 107 264 1 141 0.6365 0.847
AF-A0A183XDX1-F1-model_v4 17 264 6 179 0.5218 0.7102
AF-Q5AD02-F1-model_v4 4 263 88 342 0.4893 0.5846
AF-A0A0R4IY57-F1-model_v4 101 261 131 306 0.4392 0.7604
AF-A0A0R4ITS1-F1-model_v4 106 264 23 316 0.4313 0.7702
AF-A0A0N4STS3-F1-model_v4 106 264 163 310 0.4283 0.8081
AF-F1QN93-F1-model_v4 10 264 143 595 0.3725 0.6046
AF-A0A175VWT6-F1-model_v4 77 264 12 496 0.3578 0.648
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
B1C4D3 GH105 1 264 34 370 0.5751 0.9283
A0A2E9GC66 CBM32 106 261 33 176 0.5625 0.8287
A0A9E9K109 CBM32 9 264 1 492 0.435 0.6166
AF-A0A858MSU4-F1-model_v4 CBM32 107 264 178 324 0.4166 0.8057
AF-A0A061B3V4-F1-model_v4 AA14 9 261 32 456 0.3939 0.6356
AF-A0A7H8JXZ3-F1-model_v4 GH20 1 262 38 658 0.3918 0.5674
AF-F3ZWG9-F1-model_v4 GH43_33 28 264 254 520 0.3888 0.5746
AF-A0A7G9NY75-F1-model_v4 CBM32 , GH29 3 262 25 590 0.3874 0.548
AF-W9JP00-F1-model_v4 GH142 57 264 55 665 0.3786 0.677
AF-W5W840-F1-model_v4 GH142 23 263 133 682 0.3684 0.5823
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
B1C4D3 GH105 1 264 34 370 0.5751 0.9283
A0A2E9GC66 CBM32 106 261 33 176 0.5625 0.8287
A0A1Y0H0Z5 CBM47 103 264 23 179 0.5336 0.7661
A0A1Y0FYD6 CBM32 1 261 294 510 0.4415 0.7008
F2VQW1 CBM47 100 264 76 314 0.4384 0.7503
A0A9E9K109 CBM32 9 264 1 492 0.435 0.6166
A0A172TNE5 CBM32 , GH5 1 263 22 638 0.4102 0.5883
A0A061B3V4 AA14 9 261 32 456 0.3939 0.6356
F3ZWG9 GH43_33 28 264 254 520 0.3888 0.5746
A0A6B8RQW9 CBM32 , CBM35 5 264 406 677 0.3887 0.5998
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
7azb-assembly1.cif.gz_A 107 263 3 160 0.5823 0.7534
3cqo-assembly1.cif.gz_C 106 264 1 290 0.4502 0.7756
8ivw-assembly3.cif.gz_G 1 264 4 267 0.4501 0.5565
8ivw-assembly4.cif.gz_J 1 264 5 395 0.4439 0.5619
8ivw-assembly1.cif.gz_A 1 264 4 394 0.443 0.5607
2qqo-assembly3.cif.gz_B 16 262 1 426 0.4376 0.5824
8ivw-assembly2.cif.gz_D 1 264 4 416 0.4372 0.549
2qqm-assembly1.cif.gz_A 2 264 6 401 0.4308 0.5513
2qqk-assembly1.cif.gz_A 1 264 123 509 0.4125 0.5625
4gz9-assembly1.cif.gz_A 1 264 128 408 0.3975 0.5474
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q3TV70-F1-model_v4 107 264 1 140 0.6485 0.8641
AF-Q58DU8-F1-model_v4 107 264 1 140 0.6421 0.856
AF-Q86WQ0-F1-model_v4 107 263 1 139 0.6411 0.8569
AF-Q1ED21-F1-model_v4 107 264 1 141 0.6365 0.847
AF-Q87YX4-F1-model_v4 4 264 80 331 0.5026 0.5974
AF-Q6LPX9-F1-model_v4 4 264 79 330 0.5 0.5942
AF-B7ICG5-F1-model_v4 4 264 87 335 0.4922 0.5966
AF-Q9RKU4-F1-model_v4 4 264 118 361 0.4835 0.6219
AF-Q82LL5-F1-model_v4 4 264 117 361 0.481 0.6165
AF-O14786-F1-model_v4 1 264 149 551 0.3521 0.5547
Download Full SwissProt Results