PROTEIN: HRGMv2_4519_4_46
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Protein File & Metadata
Source:
HRGMv2_4519_4_46.pdb
Genome ID:
Protein ID:
HRGMv2_4519_4_46
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Protein Sequence
MQLTKNERAV QGSLTVLALV CAAVLVRTAL TGLEIDEPYA LALGYRLVSG DRLFASMWEP 60 HQLSALPSAA LMALYLGLTG TTTGVLLFFR AVALACKAAL SWAFYREFRR SLGPAGAGLA 120 ALVLALYTPK WFLGPDYTGQ QFHFTLAAFL CLHHYVTRGF RRPWLVVLGA VCACFGFLAF 180 PQSAAAFAVL WPGMFLLGRR GGEPRFAGVP RGAWLLLGTC AVCGGAFLLW ALQGMGFDLA 240 AFLERVQLIL HDPQYDFTAA ERLAQLGQQA LPVLRGLLWP LLAAGAFCLA VRLRRGAVPG 300 GAGLFLGLWG LLAVMQCALR AVRDGSLDER QFLPVLVLAG AWGFWRVRRQ PGAAALFWLG 360 YLPGLAAYAF ILRSTLVGLP ATFMYLTWPA VCGVMMLAGA GHRLLRWLGG ALLAAVLLFL 420 AVCRVWCVQV TGWKPATVAD TPLVQIEHGP AKGIWADEKA ADMQECLYEA LQPFAGQAVL 480 QAIGEQNGLG FLMADGTLTV AQASVISGTD SDPRFTLYYT LLPEKLPAVV LYDDAEVRDM 540 DAFHAWIEEN FAVTGRYTVT HGTASLQVLT IGGWAG 576
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0EVQ0-F1-model_v4 | 1 | 574 | 1 | 551 | 0.6554 |
0.6893 |
| AF-Q8CZ87-F1-model_v4 | 1 | 572 | 28 | 518 | 0.646 |
0.7335 |
| AF-Q9HUZ2-F1-model_v4 | 5 | 570 | 1 | 473 | 0.6316 |
0.7156 |
| AF-K0F8A5-F1-model_v4 | 1 | 576 | 16 | 668 | 0.6303 |
0.6916 |
| AF-G5EDN2-F1-model_v4 | 11 | 569 | 3 | 493 | 0.6117 |
0.6818 |
| AF-A0A0R4IE52-F1-model_v4 | 4 | 571 | 1 | 493 | 0.6001 |
0.6715 |
| AF-Q5AK24-F1-model_v4 | 2 | 569 | 1 | 481 | 0.5987 |
0.671 |
| AF-A0A5K4FC45-F1-model_v4 | 8 | 569 | 1 | 517 | 0.5803 |
0.635 |
| AF-Q9CC27-F1-model_v4 | 1 | 569 | 20 | 525 | 0.5717 |
0.6393 |
| AF-O06152-F1-model_v4 | 1 | 569 | 46 | 554 | 0.565 |
0.641 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UCV14583.1 | GT83 | 3 | 576 | 3 | 489 | 0.6816 |
0.7587 |
| ANM28871.1 | GT89 | 8 | 573 | 6 | 503 | 0.6803 |
0.7539 |
| AF-B5ZVI8-F1-model_v4 | GT83 | 3 | 575 | 1 | 495 | 0.6793 |
0.7492 |
| AF-A0A2K9Z022-F1-model_v4 | GT83 | 3 | 576 | 1 | 495 | 0.6793 |
0.7491 |
| AF-A0A1B8RBL3-F1-model_v4 | GT83 | 5 | 576 | 1 | 495 | 0.6777 |
0.7471 |
| AF-A0A2S0MJC5-F1-model_v4 | GT83 | 1 | 573 | 4 | 500 | 0.6776 |
0.7503 |
| AF-C6ATC3-F1-model_v4 | GT83 | 3 | 574 | 1 | 494 | 0.6772 |
0.7481 |
| AF-W0IAP8-F1-model_v4 | GT83 | 3 | 574 | 1 | 494 | 0.6769 |
0.7479 |
| AF-A0A2Z4YLI7-F1-model_v4 | GT83 | 5 | 574 | 1 | 493 | 0.6762 |
0.7472 |
| AF-A0A2L1CWE1-F1-model_v4 | GT83 | 2 | 573 | 1 | 493 | 0.6754 |
0.7475 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A4V0HYL9 | GT83 | 1 | 576 | 10 | 498 | 0.6817 |
0.7617 |
| UCV14583.1 | GT83 | 3 | 576 | 3 | 489 | 0.6816 |
0.7587 |
| ANM28871.1 | GT89 | 8 | 573 | 6 | 503 | 0.6803 |
0.7539 |
| A0A974TIM4 | GT83 | 3 | 576 | 7 | 506 | 0.6745 |
0.7446 |
| QSV45560.1 | GT83 | 1 | 576 | 2 | 495 | 0.6731 |
0.7434 |
| D5EJZ3 | GT83 | 1 | 576 | 14 | 507 | 0.6725 |
0.7553 |
| A0A975CGT2 | GT83 | 3 | 573 | 6 | 502 | 0.6723 |
0.7467 |
| A0A1L9GN74 | GT83 | 5 | 576 | 1 | 493 | 0.6717 |
0.7457 |
| A0A974TGW9 | GT83 | 1 | 574 | 3 | 501 | 0.6684 |
0.7376 |
| A0A4R7FJY4 | GT83 | 4 | 576 | 7 | 515 | 0.6676 |
0.731 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6s7o-assembly1.cif.gz_A | 1 | 576 | 3 | 656 | 0.5669 |
0.6203 |
| 7zlh-assembly1.cif.gz_A | 1 | 575 | 1 | 654 | 0.5608 |
0.6143 |
| 6ezn-assembly1.cif.gz_F | 1 | 576 | 2 | 623 | 0.5606 |
0.6103 |
| 7zli-assembly1.cif.gz_A | 1 | 575 | 1 | 661 | 0.5593 |
0.6152 |
| 8b6l-assembly1.cif.gz_I | 1 | 576 | 1 | 683 | 0.5577 |
0.6211 |
| 7zlg-assembly1.cif.gz_A | 1 | 575 | 1 | 662 | 0.5566 |
0.6126 |
| 8agc-assembly1.cif.gz_A | 1 | 576 | 2 | 670 | 0.5537 |
0.6202 |
| 3wak-assembly1.cif.gz_A | 2 | 576 | 1 | 857 | 0.5353 |
0.6504 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q1MJ97-F1-model_v4 | 1 | 575 | 2 | 494 | 0.6725 |
0.744 |
| AF-Q1MJ94-F1-model_v4 | 8 | 576 | 1 | 497 | 0.6639 |
0.7318 |
| AF-Q1MLH5-F1-model_v4 | 7 | 576 | 1 | 472 | 0.6633 |
0.7476 |
| AF-Q6D2F3-F1-model_v4 | 5 | 572 | 1 | 554 | 0.6287 |
0.6637 |
| AF-C6DAW3-F1-model_v4 | 5 | 572 | 1 | 554 | 0.6285 |
0.6637 |
| AF-Q7N3Q9-F1-model_v4 | 2 | 572 | 1 | 552 | 0.625 |
0.6607 |
| AF-B2K5L1-F1-model_v4 | 6 | 572 | 1 | 553 | 0.6235 |
0.6585 |
| AF-Q1C744-F1-model_v4 | 6 | 572 | 1 | 553 | 0.6235 |
0.6585 |
| AF-A4TIM6-F1-model_v4 | 6 | 572 | 1 | 553 | 0.6234 |
0.6586 |
| AF-Q66A06-F1-model_v4 | 6 | 572 | 1 | 553 | 0.6232 |
0.6583 |