PROTEIN: HRGMv2_4309_40_16
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Protein File & Metadata
Source:
HRGMv2_4309_40_16.pdb
Genome ID:
Protein ID:
HRGMv2_4309_40_16
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Protein Sequence
MLGIIYIVFI FLLGRELAPR TVRTRPWLLL PFSFGTGSLI LGWITYFTAF FASVCLGAES 60 PLFYGNLLTM TGGAAFLGKR YFSRIRERGI DLGNLRDCRT KLSREKGEIL FFLMLAAFIS 120 WTMFYVFHEK DGILYAGFSV FGDYAPHTAM IRSFSWGNNF PTQYPHFGGE DVKYHFMFQF 180 LAGNLEYLGM RLDIAYNLIS ILALTGFLMM LYMLAVRITG RKGAGFLGIL FFFFRSGTAF 240 FRFFYEHVQA GDLLEVLKNN TAFIGYTPNE DWGLWNYNVY LNQRHLAFGL LIVSLALWFY 300 LEWVEETADS SAKGAGWLKE RFFTRKAWWV RKPETALLLG VMLGMTSFWN GAAVIGGLLI 360 LAGFGLFSDG KLDYALTAGT AVLFSFLQSK IFIQGEAMEV SFYWGFLAED KSAAGTAWYI 420 FSMSGIYFAG LLVLLFFLKR KERMVLSSFF LPAVFAFFVS LTPDINVNHK YIMISYAFLT 480 MFWAWAVVSL WRKCLAGRAG ALLLSLCLTV TGVYDFVVIL KDNDADHRVS VPLYSSLSQW 540 ISETLDKGDL MLTPEYSINE VTMAGEMLYC GWPYYAWSAG YDTNARAAAA VQIYTTEDQD 600 TLRTLVAQEN ITYILFEEGM EFEQETCRED VIARTYPLVY RSEDGRIRIY ET 652
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0EVV4-F1-model_v4 | 19 | 652 | 16 | 658 | 0.5543 |
0.5884 |
| AF-P34413-F1-model_v4 | 97 | 652 | 25 | 683 | 0.5411 |
0.6539 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1X2BLT7-F1-model_v4 | GT85 | 18 | 652 | 1 | 621 | 0.6313 |
0.6652 |
| AF-D6ZD63-F1-model_v4 | GT85 | 19 | 652 | 2 | 614 | 0.6285 |
0.6668 |
| AF-A0A4P8Q4R8-F1-model_v4 | GT85 | 14 | 652 | 1 | 614 | 0.624 |
0.6602 |
| AF-A0A7I7VWZ3-F1-model_v4 | GT85 | 18 | 652 | 6 | 638 | 0.6232 |
0.6523 |
| AF-A0A7G1IV10-F1-model_v4 | GT85 | 27 | 652 | 25 | 610 | 0.6172 |
0.6797 |
| QXG77167.1 | GT85 | 18 | 652 | 40 | 666 | 0.609 |
0.6539 |
| AF-A0A5Q0C359-F1-model_v4 | GT83 | 96 | 652 | 11 | 483 | 0.583 |
0.697 |
| AF-A0A0B2VC16-F1-model_v4 | GT98 | 21 | 652 | 2 | 670 | 0.5491 |
0.5899 |
| AF-P34413-F1-model_v4 | GT98 | 97 | 652 | 25 | 683 | 0.5411 |
0.6539 |
| AF-A8Y3M2-F1-model_v4 | GT98 | 97 | 652 | 28 | 687 | 0.5409 |
0.6545 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| W5XYU2 | GT85 | 20 | 652 | 1 | 602 | 0.627 |
0.6691 |
| P9WN02 | GT85 | 18 | 652 | 21 | 638 | 0.6233 |
0.6678 |
| A0A7H0JZ40 | GT85 | 19 | 652 | 6 | 614 | 0.6205 |
0.6607 |
| A0A516X707 | GT85 | 19 | 652 | 16 | 640 | 0.6191 |
0.6554 |
| A0A516X797 | GT85 | 19 | 652 | 1 | 654 | 0.6189 |
0.6533 |
| I4BQW1 | GT85 | 18 | 652 | 4 | 653 | 0.6164 |
0.6503 |
| A0A975MX64 | GT85 | 19 | 652 | 17 | 632 | 0.6133 |
0.6561 |
| A0A562EN01 | GT85 | 18 | 652 | 35 | 662 | 0.6128 |
0.6579 |
| A0A076MHF5 | GT85 | 18 | 652 | 26 | 648 | 0.6125 |
0.6556 |
| QXG77167.1 | GT85 | 18 | 652 | 40 | 666 | 0.609 |
0.6539 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8if8-assembly1.cif.gz_B | 17 | 652 | 4 | 619 | 0.629 |
0.6652 |
| 7oci-assembly1.cif.gz_F | 101 | 652 | 5 | 605 | 0.5477 |
0.6465 |
| 8b6l-assembly1.cif.gz_I | 101 | 652 | 3 | 676 | 0.534 |
0.65 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P55583-F1-model_v4 | 1 | 651 | 11 | 662 | 0.7344 |
0.7592 |
| AF-A0R611-F1-model_v4 | 18 | 652 | 1 | 617 | 0.6296 |
0.6665 |
| AF-P9WN03-F1-model_v4 | 18 | 652 | 21 | 638 | 0.6239 |
0.6686 |
| AF-P9WN02-F1-model_v4 | 18 | 652 | 21 | 638 | 0.6236 |
0.6682 |
| AF-P34413-F1-model_v4 | 97 | 652 | 25 | 683 | 0.5411 |
0.6539 |
| AF-A8Y3M2-F1-model_v4 | 97 | 652 | 28 | 687 | 0.5406 |
0.6542 |