PROTEIN: HRGMv2_4190_4_35
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Protein File & Metadata
Source:
HRGMv2_4190_4_35.pdb
Genome ID:
Protein ID:
HRGMv2_4190_4_35
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Protein Sequence
MLGRLFTAIT PQPYGLFPYR SVDFPGQDPF QVMESTVLEN YIRQHIADQP GDDVTFDWLC 60 GEPSPEKLAF FREVVAIQAR LGGSKRIHNS LLIDGYLPEE GWAQFLSHHQ WLVELPLSGP 120 EEWHDLARAR RGLPGDHARI MATLGLLRQH QVSIKLLVEV NRVNCQHPRG LYDWLKLTGV 180 PFIQFVPRSA GDTSEALDGP LWGHFLNTVF SCWVHNDIGQ IFIQQFDAAL GAWCGLKPAP 240 GMTPACQRCE MAWLCQVQPV TTPDVNCALC AGYLAFFTYS APFMRVMRDL IAQRRSPMEL 300 MPLLANGRKS TPENA 315
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P76134-F1-model_v4 | 11 | 311 | 1 | 385 | 0.7571 |
0.8825 |
| AF-Q8ZRZ6-F1-model_v4 | 10 | 305 | 6 | 396 | 0.7496 |
0.8981 |
| AF-A0A0H3GTJ6-F1-model_v4 | 32 | 312 | 1 | 345 | 0.7469 |
0.8961 |
| AF-Q8ZPW1-F1-model_v4 | 10 | 311 | 4 | 396 | 0.7398 |
0.8733 |
| AF-Q8ZKV2-F1-model_v4 | 11 | 314 | 21 | 425 | 0.7282 |
0.8943 |
| AF-Q8ZM33-F1-model_v4 | 11 | 306 | 23 | 394 | 0.7263 |
0.8694 |
| AF-A0A0H3GTD2-F1-model_v4 | 11 | 309 | 23 | 395 | 0.7262 |
0.8624 |
| AF-P25550-F1-model_v4 | 11 | 308 | 9 | 408 | 0.7262 |
0.879 |
| AF-Q8ZL07-F1-model_v4 | 129 | 305 | 1 | 176 | 0.6648 |
0.8625 |
| AF-A0A077ZDQ0-F1-model_v4 | 10 | 259 | 9 | 283 | 0.6646 |
0.8229 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4k39-assembly2.cif.gz_B | 10 | 297 | 2 | 359 | 0.7092 |
0.8376 |
| 4k38-assembly2.cif.gz_B | 10 | 297 | 2 | 362 | 0.7089 |
0.8403 |
| 4k36-assembly2.cif.gz_B | 10 | 297 | 2 | 363 | 0.7086 |
0.8423 |
| 4k39-assembly1.cif.gz_A | 10 | 292 | 2 | 361 | 0.7054 |
0.8493 |
| 4k37-assembly2.cif.gz_B | 10 | 297 | 1 | 367 | 0.7013 |
0.8364 |
| 4k37-assembly1.cif.gz_A | 11 | 295 | 2 | 364 | 0.6983 |
0.8384 |
| 4k36-assembly1.cif.gz_A | 10 | 297 | 2 | 370 | 0.6959 |
0.8433 |
| 5why-assembly2.cif.gz_B | 11 | 301 | 82 | 421 | 0.6059 |
0.7596 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P76134-F1-model_v4 | 11 | 311 | 1 | 385 | 0.7571 |
0.8825 |
| AF-Q02550-F1-model_v4 | 1 | 311 | 1 | 412 | 0.7392 |
0.8618 |
| AF-P20714-F1-model_v4 | 11 | 309 | 23 | 399 | 0.7285 |
0.8738 |
| AF-P25550-F1-model_v4 | 11 | 308 | 9 | 408 | 0.7262 |
0.879 |
| AF-Q9X758-F1-model_v4 | 11 | 306 | 23 | 395 | 0.7211 |
0.8638 |
| AF-A0Q2E1-F1-model_v4 | 10 | 296 | 3 | 374 | 0.7084 |
0.8549 |
| AF-Q8XMQ3-F1-model_v4 | 10 | 295 | 3 | 370 | 0.7018 |
0.8456 |
| AF-Q0TTH1-F1-model_v4 | 10 | 296 | 3 | 370 | 0.7014 |
0.8418 |
| AF-P73639-F1-model_v4 | 11 | 307 | 25 | 396 | 0.6645 |
0.7983 |
| AF-P31443-F1-model_v4 | 3 | 305 | 4 | 165 | 0.66 |
0.8923 |