PROTEIN: HRGMv2_4186_61_6
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Protein File & Metadata
Source:
HRGMv2_4186_61_6.pdb
Genome ID:
Protein ID:
HRGMv2_4186_61_6
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Protein Sequence
MRQLILAKLY AFCCALWMYR YIVLVPMVTL PILLPVGSLF KTKMYYSQTT ILVQEAAMLN 60 PFLGDLSISM NLQQRMKALT ILLHSQSTLE QVVVDLELAS QENKRQIAVR VGELKQHLNL 120 SLLSDELVSI GLTWKYPSEI PVILNTVSNI FLDKLRAPGR ASIDNSEQFL QQQLAITQKE 180 LEQAEAELAS FKTQNANDLP HLRGMNEQAN IELNRQLHET ELNLMAAKSS RDNLYQHLAR 240 TNPLIGMLEQ EIVDSESRLA LLRASYTDKH SKIRSELRKL SRLQQKRAQL LELQQSLTPD 300 QINQLWQRIA NETQAQASTS QPLLLSQFEK LQDADEQIAA LSNELNLLKQ KAKYLSEKRN 360 VFTRLEKQLT ALERNYKVKA NIYDQLLERF EMAKVTGQLG RFEDPDKLKI IDKPSIPNQP 420 LNWPWWLNMV IGLILGIILG LSTTTCLMLL DSRIYQLEQL KQTSNSPILA EIPNFHTMR 479
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q0P8G9-F1-model_v4 | 19 | 450 | 15 | 368 | 0.5544 |
0.6679 |
| AF-Q9I1N4-F1-model_v4 | 9 | 479 | 3 | 643 | 0.5145 |
0.617 |
| AF-P76387-F1-model_v4 | 4 | 478 | 16 | 567 | 0.4236 |
0.5182 |
| AF-Q9F7B1-F1-model_v4 | 5 | 478 | 18 | 566 | 0.4173 |
0.5113 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UBM63584.1 | CBM50 | 7 | 479 | 1 | 760 | 0.4793 |
0.6541 |
| AF-A0A8B0SMZ4-F1-model_v4 | GT4 | 12 | 473 | 434 | 989 | 0.4508 |
0.6548 |
| QTR45648.1 | GT4 | 22 | 474 | 437 | 991 | 0.435 |
0.6396 |
| A0A2L0WKS9 | GT0 | 5 | 475 | 27 | 756 | 0.3817 |
0.5402 |
| AF-A0A2L0WKS9-F1-model_v4 | GT0 | 5 | 475 | 27 | 756 | 0.3817 |
0.5402 |
| AF-A0A387H7L2-F1-model_v4 | GT0 | 5 | 475 | 27 | 724 | 0.3803 |
0.5374 |
| AF-A0A0B4X6N3-F1-model_v4 | GT0 | 5 | 471 | 27 | 757 | 0.3793 |
0.5403 |
| AF-A0A1L5NL39-F1-model_v4 | GT0 | 4 | 472 | 26 | 535 | 0.3779 |
0.5361 |
| AF-A0A1L5P6C4-F1-model_v4 | GT0 | 4 | 475 | 26 | 760 | 0.3764 |
0.531 |
Structural Homologs -
CAZyme-ID50
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P57034-F1-model_v4 | 17 | 451 | 23 | 383 | 0.5928 |
0.7128 |
| AF-P22930-F1-model_v4 | 10 | 451 | 8 | 377 | 0.5775 |
0.6752 |
| AF-P43111-F1-model_v4 | 13 | 459 | 73 | 434 | 0.5724 |
0.7238 |
| AF-P62587-F1-model_v4 | 18 | 451 | 20 | 382 | 0.5408 |
0.6477 |
| AF-P42501-F1-model_v4 | 18 | 451 | 20 | 382 | 0.5379 |
0.644 |
| AF-P62586-F1-model_v4 | 18 | 451 | 20 | 382 | 0.5284 |
0.6322 |
| AF-P32014-F1-model_v4 | 21 | 451 | 27 | 387 | 0.5208 |
0.6275 |
| AF-P33698-F1-model_v4 | 8 | 474 | 32 | 722 | 0.4895 |
0.6284 |
| AF-P76387-F1-model_v4 | 4 | 478 | 16 | 567 | 0.4236 |
0.5182 |
| AF-Q9F7B1-F1-model_v4 | 5 | 478 | 18 | 566 | 0.4173 |
0.5113 |