PROTEIN: HRGMv2_4186_61_2
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Protein File & Metadata
Source:
HRGMv2_4186_61_2.pdb
Genome ID:
Protein ID:
HRGMv2_4186_61_2
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Protein Sequence
MSYASAILIY SFGLIISKLI GLLMQPFVTS QLGIENYARL DILIVTSSIA SIIVTFGLID 60 GICRFAHDEN YRQDDCLSTA MGLVFWGGGV FTSIALLNGH FIQQLLPGSP PLWALYLTFI 120 NLYLNALAAI PLTKLRMQHR PIKFAIAQAV FAITQAIGII VLIPYFQVTG IFIAAVVSQL 180 LQLIILYRDL PSLRLVYSSI FIRYGSSIML SGVLGFICLG AERWAIAYYL GLEFLTPYAI 240 AMQWAIAASL LLEPFSLWWF PKRFNLLKNE KLLADITILG CQICILICAI VTMFGPLFLY 300 FWLSANFSQS ANFIGLIAIM IMLKGISTLL NIGCYYQASG QHIIQINLVA TGLSIINIFM 360 ILPPFGLLGI IWGSIVIQAI KVFAFYYWSQ KELPLPYPLS RLFISLMLLA GIFASSTLIL 420 IQALLLILLI GLIITPFFLT RISYWSNTA 449
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GSJ3-F1-model_v4 | 1 | 442 | 1 | 472 | 0.8367 |
0.892 |
| AF-Q5FAD8-F1-model_v4 | 2 | 442 | 1 | 464 | 0.8326 |
0.8869 |
| AF-H9L497-F1-model_v4 | 1 | 443 | 1 | 478 | 0.823 |
0.8871 |
| AF-P77377-F1-model_v4 | 1 | 443 | 1 | 478 | 0.8206 |
0.8847 |
| AF-Q2G262-F1-model_v4 | 1 | 446 | 4 | 473 | 0.8205 |
0.8677 |
| AF-P71399-F1-model_v4 | 1 | 394 | 1 | 399 | 0.8162 |
0.8897 |
| AF-A0A1A7SN45-F1-model_v4 | 4 | 449 | 8 | 469 | 0.8161 |
0.8604 |
| AF-Q8DPI1-F1-model_v4 | 1 | 442 | 2 | 483 | 0.8128 |
0.881 |
| AF-Q9I1M8-F1-model_v4 | 3 | 443 | 1 | 469 | 0.8085 |
0.8604 |
| AF-Q32ET1-F1-model_v4 | 1 | 448 | 1 | 511 | 0.8033 |
0.8732 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 1 | 449 | 5 | 510 | 0.8238 |
0.8946 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 1 | 446 | 41 | 544 | 0.7777 |
0.8716 |
| QNU38870.1 | GT4 | 2 | 442 | 1 | 468 | 0.7464 |
0.8816 |
| AF-A1R6N5-F1-model_v4 | GT2 | 1 | 449 | 10 | 845 | 0.6664 |
0.8776 |
| AF-A0A3T0K5S7-F1-model_v4 | GT2 | 1 | 449 | 1 | 823 | 0.6607 |
0.8645 |
| A0A0C5BEZ8 | GT4 | 1 | 447 | 1 | 895 | 0.6593 |
0.8867 |
| AF-A0A160KSX1-F1-model_v4 | GT4 | 1 | 449 | 5 | 870 | 0.6589 |
0.8789 |
| AF-A0A3T0RPT8-F1-model_v4 | GT4 | 1 | 447 | 3 | 568 | 0.6586 |
0.871 |
| AF-F9ZKY1-F1-model_v4 | GT2 | 2 | 449 | 32 | 520 | 0.6586 |
0.8707 |
| AF-A0A2U8PPB3-F1-model_v4 | GT4 | 3 | 449 | 1 | 527 | 0.6584 |
0.8658 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 1 | 449 | 5 | 510 | 0.8238 |
0.8946 |
| A0A160T2N7 | GT28 | 1 | 446 | 41 | 544 | 0.7777 |
0.8716 |
| QNU38870.1 | GT4 | 2 | 442 | 1 | 468 | 0.7464 |
0.8816 |
| A0A3T0K5S7 | GT2 | 1 | 449 | 1 | 823 | 0.6607 |
0.8645 |
| QJC17489.1 | GT2 | 1 | 445 | 341 | 839 | 0.6598 |
0.8754 |
| A0A0C5BEZ8 | GT4 | 1 | 447 | 1 | 895 | 0.6593 |
0.8867 |
| A0A3T0RPT8 | GT4 | 1 | 447 | 3 | 568 | 0.6586 |
0.871 |
| F9ZKY1 | GT2 | 2 | 449 | 32 | 520 | 0.6586 |
0.8707 |
| A0A2U8PPB3 | GT4 | 3 | 449 | 1 | 527 | 0.6584 |
0.8658 |
| A0A5Q0NSF2 | GT2 | 1 | 449 | 3 | 632 | 0.6562 |
0.8721 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7waw-assembly1.cif.gz_A | 8 | 441 | 1 | 496 | 0.7849 |
0.8678 |
| 6nc6-assembly2.cif.gz_B | 4 | 442 | 1 | 461 | 0.778 |
0.8277 |
| 7wag-assembly1.cif.gz_A | 4 | 449 | 4 | 517 | 0.7729 |
0.8533 |
| 4mlb-assembly1.cif.gz_C | 1 | 394 | 4 | 447 | 0.6674 |
0.7787 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q48457-F1-model_v4 | 1 | 445 | 1 | 480 | 0.823 |
0.8792 |
| AF-P77377-F1-model_v4 | 1 | 443 | 1 | 478 | 0.8206 |
0.8847 |
| AF-O32273-F1-model_v4 | 1 | 439 | 3 | 475 | 0.8197 |
0.8842 |
| AF-P39855-F1-model_v4 | 3 | 394 | 1 | 396 | 0.8189 |
0.8917 |
| AF-P33699-F1-model_v4 | 1 | 449 | 6 | 485 | 0.8182 |
0.8748 |
| AF-P71399-F1-model_v4 | 1 | 394 | 1 | 399 | 0.8162 |
0.8897 |
| AF-P71060-F1-model_v4 | 1 | 445 | 1 | 495 | 0.8142 |
0.885 |
| AF-Q9CNC5-F1-model_v4 | 1 | 394 | 1 | 399 | 0.8142 |
0.8859 |
| AF-O51750-F1-model_v4 | 1 | 449 | 2 | 506 | 0.8059 |
0.8707 |
| AF-B4E9G3-F1-model_v4 | 1 | 447 | 1 | 516 | 0.8056 |
0.8808 |