PROTEIN: HRGMv2_4186_61_12
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Protein File & Metadata
Source:
HRGMv2_4186_61_12.pdb
Genome ID:
Protein ID:
HRGMv2_4186_61_12
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Protein Sequence
MTNPWLSHEY EQIFQHIYRT HARVIIMCSA TKQSGCSTIA LWLAQRCANQ QNTLLVELDL 60 CGAGLGYSPV EWQLATEHHV LHSDNLFILP QPDSAQSILQ LRQQDKLQQY LNLWQQYYEF 120 IVIDLGAVNH KHWRQLSACN LSKISDIAIL SVALGKTTQE ELHEAIELLK KGQLPLAGCI 180 ANQFYNPSLQ QQLLNSLQRY KKIIPTKLFL FLERKIKHNQ FLQGTER 227
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2G1K7-F1-model_v4 | 1 | 227 | 16 | 227 | 0.7171 |
0.7891 |
| AF-A0A133CEM5-F1-model_v4 | 1 | 226 | 22 | 228 | 0.7126 |
0.8063 |
| AF-Q2FUV2-F1-model_v4 | 1 | 227 | 16 | 224 | 0.7106 |
0.7952 |
| AF-K0EZX4-F1-model_v4 | 1 | 226 | 238 | 445 | 0.5576 |
0.8106 |
| AF-A0A5S4Y6F7-F1-model_v4 | 6 | 226 | 15 | 274 | 0.5428 |
0.6498 |
| AF-Q38C73-F1-model_v4 | 21 | 226 | 52 | 293 | 0.5187 |
0.6703 |
| AF-P76387-F1-model_v4 | 1 | 227 | 501 | 714 | 0.4873 |
0.7909 |
| AF-Q9F7B1-F1-model_v4 | 1 | 227 | 500 | 713 | 0.4872 |
0.7904 |
| AF-A0A0H3GVU7-F1-model_v4 | 1 | 227 | 498 | 713 | 0.4841 |
0.7782 |
| AF-P38134-F1-model_v4 | 1 | 227 | 507 | 721 | 0.4805 |
0.7781 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A5C1Q898-F1-model_v4 | GT4 | 1 | 185 | 550 | 743 | 0.4561 |
0.8534 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A5C1Q898 | GT4 | 1 | 185 | 550 | 743 | 0.4561 |
0.8534 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6u1q-assembly1.cif.gz_B | 1 | 185 | 6 | 203 | 0.7269 |
0.8589 |
| 4jmp-assembly1.cif.gz_A | 1 | 224 | 27 | 226 | 0.7102 |
0.8194 |
| 4jlv-assembly1.cif.gz_A | 1 | 186 | 33 | 228 | 0.6971 |
0.8644 |
| 3la6-assembly2.cif.gz_P | 1 | 227 | 39 | 252 | 0.6843 |
0.7868 |
| 3la6-assembly1.cif.gz_G | 1 | 227 | 43 | 255 | 0.6814 |
0.7905 |
| 3la6-assembly2.cif.gz_M | 1 | 227 | 40 | 252 | 0.6813 |
0.7866 |
| 3la6-assembly2.cif.gz_K | 1 | 227 | 43 | 255 | 0.6811 |
0.7891 |
| 3la6-assembly1.cif.gz_E | 1 | 227 | 44 | 256 | 0.681 |
0.7912 |
| 3la6-assembly1.cif.gz_H | 1 | 227 | 43 | 255 | 0.6804 |
0.7908 |
| 3la6-assembly2.cif.gz_L | 1 | 227 | 40 | 253 | 0.68 |
0.7856 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71051-F1-model_v4 | 1 | 227 | 20 | 226 | 0.7198 |
0.8076 |
| AF-P39851-F1-model_v4 | 1 | 227 | 16 | 227 | 0.7183 |
0.7904 |
| AF-Q9AHD2-F1-model_v4 | 1 | 227 | 12 | 226 | 0.705 |
0.7636 |
| AF-P96716-F1-model_v4 | 1 | 227 | 20 | 230 | 0.705 |
0.7927 |
| AF-Q54520-F1-model_v4 | 1 | 227 | 12 | 223 | 0.7017 |
0.7726 |
| AF-Q9AFI1-F1-model_v4 | 1 | 225 | 12 | 219 | 0.7003 |
0.785 |
| AF-P0C0T9-F1-model_v4 | 1 | 227 | 12 | 223 | 0.6982 |
0.7713 |
| AF-Q04663-F1-model_v4 | 1 | 227 | 12 | 226 | 0.6955 |
0.7609 |
| AF-Q3K0T0-F1-model_v4 | 1 | 225 | 12 | 222 | 0.6955 |
0.7737 |
| AF-P76387-F1-model_v4 | 1 | 227 | 501 | 714 | 0.4873 |
0.7909 |