PROTEIN: HRGMv2_4127_5_20
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Protein File & Metadata
Source:
HRGMv2_4127_5_20.pdb
Genome ID:
Protein ID:
HRGMv2_4127_5_20
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Protein Sequence
MMREATLGAP VLVSTLCRAE HFERCLESLA ANTWAHRTPV YVALDYPAKE SHRSGYDRIC 60 AYLDAFDGTR FGEFHVIKRE RNFGAGINGA LAREMLFERY GRLIYSEDDL EYAPAFLEYM 120 NAALDRYEDD PRVDTICGYS YPLPWRVCEG ANAFFCDSAY PSWGYGTWDS KRRISEGLIK 180 SGWLVDEFDR VFHDGTLDRM VNNARCEYLA YAGLEMDPSI PRTPYDFVCR MYLALSGTCV 240 VCPTVSLVRN HGFDGSGEYC ASIAEASGAH SQDYNYAAQE LFAGDTFHLD VDERMSSGTE 300 NGRLLDEFLY TPRFLKVEAC MASVLYRLFG HAGLRFGCGA YHAVRRIVRG N 351
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A3P7DV18-F1-model_v4 | 1 | 302 | 37 | 304 | 0.6108 |
0.7538 |
| AF-Q4D3G6-F1-model_v4 | 1 | 327 | 58 | 379 | 0.6103 |
0.7049 |
| AF-Q4DMC0-F1-model_v4 | 1 | 327 | 48 | 379 | 0.6043 |
0.6875 |
| AF-A0A3P7Q5X9-F1-model_v4 | 5 | 319 | 34 | 348 | 0.5898 |
0.6692 |
| AF-A0A044SGH9-F1-model_v4 | 1 | 351 | 5 | 415 | 0.5731 |
0.6412 |
| AF-A0A0K0ETJ8-F1-model_v4 | 1 | 351 | 29 | 436 | 0.5602 |
0.6389 |
| AF-A0A044SYE9-F1-model_v4 | 5 | 337 | 46 | 390 | 0.5569 |
0.6335 |
| AF-A0A0R0E9B2-F1-model_v4 | 3 | 342 | 4 | 314 | 0.5562 |
0.6514 |
| AF-G5EBG7-F1-model_v4 | 1 | 351 | 62 | 457 | 0.5526 |
0.643 |
| AF-A0A0K0JHB5-F1-model_v4 | 4 | 315 | 72 | 385 | 0.5446 |
0.6696 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-D4LZG3-F1-model_v4 | GT0 | 6 | 348 | 1 | 344 | 0.9138 |
0.9374 |
| AF-F4LID9-F1-model_v4 | GT0 | 3 | 351 | 4 | 332 | 0.8663 |
0.9137 |
| AF-A0A5B7ZML3-F1-model_v4 | GT0 | 3 | 346 | 1 | 308 | 0.7998 |
0.8709 |
| AF-A5GQE1-F1-model_v4 | GT0 | 6 | 347 | 1 | 301 | 0.7967 |
0.8733 |
| WFB91434.1 | GT0 | 6 | 346 | 1 | 303 | 0.7918 |
0.8684 |
| AF-C6W5Q2-F1-model_v4 | GT0 | 5 | 345 | 1 | 297 | 0.7908 |
0.8746 |
| AF-F8E8L4-F1-model_v4 | GT0 | 6 | 350 | 1 | 305 | 0.7867 |
0.8667 |
| A0A9X1PGV1 | GT0 | 5 | 342 | 4 | 300 | 0.7835 |
0.8712 |
| AF-E4RZQ1-F1-model_v4 | GT0 | 6 | 341 | 1 | 295 | 0.7811 |
0.8702 |
| AF-A0A1M7BGI0-F1-model_v4 | GT0 | 5 | 315 | 1 | 292 | 0.781 |
0.8817 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1B1U5H3 | GT13 | 3 | 316 | 1 | 296 | 0.7557 |
0.8509 |
| WBV42548.1 | GT13 | 3 | 342 | 8 | 310 | 0.6552 |
0.7298 |
| A0A0P0Z2Q8 | GT2 | 2 | 320 | 1 | 261 | 0.598 |
0.6991 |
| UQZ80977.1 | GT2 | 6 | 273 | 5 | 229 | 0.5909 |
0.742 |
| C1EGW4 | GT13 | 9 | 316 | 1 | 314 | 0.5883 |
0.6704 |
| A0A9C7F9S2 | GT4 | 3 | 351 | 1 | 537 | 0.5839 |
0.8022 |
| T2KMB5 | GT2 | 4 | 350 | 4 | 303 | 0.5825 |
0.6547 |
| A0A2Z4U7J1 | GT2 | 4 | 351 | 1 | 299 | 0.5789 |
0.6531 |
| A0A7R6SR26 | GT2 | 4 | 316 | 1 | 258 | 0.5734 |
0.6881 |
| UBM60722.1 | GT2 | 5 | 331 | 4 | 253 | 0.5726 |
0.7026 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2apc-assembly1.cif.gz_A | 6 | 337 | 1 | 340 | 0.5884 |
0.6283 |
| 1fo8-assembly1.cif.gz_A | 6 | 337 | 1 | 328 | 0.5673 |
0.6023 |
| 5ggi-assembly1.cif.gz_A | 3 | 312 | 42 | 351 | 0.5539 |
0.6698 |
| 5vcm-assembly1.cif.gz_A | 4 | 319 | 24 | 331 | 0.5412 |
0.626 |
| 1h7l-assembly1.cif.gz_A | 7 | 322 | 1 | 231 | 0.5372 |
0.6743 |
| 5vcr-assembly1.cif.gz_A | 2 | 319 | 28 | 332 | 0.5346 |
0.6241 |
| 5vcr-assembly2.cif.gz_B | 2 | 318 | 26 | 326 | 0.5343 |
0.6256 |
| 5vcm-assembly2.cif.gz_B | 4 | 318 | 36 | 340 | 0.5337 |
0.6294 |
| 5vcs-assembly1.cif.gz_B | 3 | 315 | 26 | 304 | 0.5298 |
0.6465 |
| 6hnq-assembly4.cif.gz_Q | 6 | 345 | 1 | 308 | 0.5101 |
0.5666 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A5U6W5-F1-model_v4 | 4 | 316 | 1 | 227 | 0.5421 |
0.714 |
| AF-P9WMX7-F1-model_v4 | 4 | 316 | 1 | 228 | 0.542 |
0.711 |
| AF-P71054-F1-model_v4 | 3 | 283 | 1 | 275 | 0.5407 |
0.6256 |
| AF-P75086-F1-model_v4 | 4 | 330 | 2 | 299 | 0.5352 |
0.5983 |
| AF-Q9XGM8-F1-model_v4 | 2 | 315 | 99 | 408 | 0.532 |
0.6767 |
| AF-P27808-F1-model_v4 | 3 | 337 | 102 | 445 | 0.5304 |
0.6302 |
| AF-Q9ZDI9-F1-model_v4 | 5 | 329 | 6 | 283 | 0.5303 |
0.645 |
| AF-P26572-F1-model_v4 | 5 | 337 | 102 | 443 | 0.5288 |
0.6305 |
| AF-Q09325-F1-model_v4 | 5 | 337 | 104 | 445 | 0.5279 |
0.6305 |
| AF-P27115-F1-model_v4 | 5 | 337 | 104 | 445 | 0.5278 |
0.6303 |