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PROTEIN: HRGMv2_4127_33_2

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_4127_33_2.pdb
Genome ID:
HRGMv2_4127
Protein ID:
HRGMv2_4127_33_2

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Detailed structural information will appear here after analysis...

Protein Sequence 
MSKSDKGLSV   KQNMLWNMVG   SSIGLACQWA   ISIIVVRLAT   DMESAGLYSL   AVSVYGIFSP 60
IANFGMYTYL   ITDMDNKNTV   GEYLSLVSLT   SFCALAVTQL   YAMITCRPNA   WLIIGSYALY 120
KGIAVVIDIM   HAADQKAHRM   DYIGISLAMQ   GVLSLAAFTL   VFFLSHNLVA   SILAMAGVTL 180
IIGFFYDLPK   MKSLFPVKLG   ICRRKAMTIL   SGCALIVVAS   IATGAFASLP   RQSLSSIMGD 240
SMLGIYASVA   TPVAIIQVGS   TYIYNPLIGY   FAESYHASNN   ERFRELVKTT   VTGILAIGVL 300
SLLGAVVLGR   PALSLLYGQT   VAEHVDLLFP   LIISSLLLGV   ASFLSNLLVA   VRALRMMVIG 360
SLGALVISAV   LSAPLITAFG   MNGATYALMA   ACLSSIAISA   MGICLQTKSQ   FTSKGADSMS 420
A 421
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P71399-F1-model_v4 8 410 1 401 0.8259 0.8661
AF-P0AAA7-F1-model_v4 8 412 1 416 0.8087 0.8563
AF-Q9L6Q9-F1-model_v4 8 412 1 416 0.8051 0.8531
AF-A0A0H3GLL0-F1-model_v4 8 412 1 416 0.8051 0.8533
AF-Q329X0-F1-model_v4 8 412 1 416 0.7988 0.8471
AF-P37746-F1-model_v4 9 415 6 415 0.7978 0.8418
AF-P26400-F1-model_v4 6 411 7 430 0.7967 0.8547
AF-K0EXA3-F1-model_v4 1 421 22 450 0.7928 0.8445
AF-P9WKX9-F1-model_v4 1 408 18 431 0.7904 0.8446
AF-P9WLW1-F1-model_v4 3 411 20 432 0.7903 0.8432
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A160T089-F1-model_v4 GT4 5 409 2 436 0.7709 0.8924
AF-A0A160T2N7-F1-model_v4 GT28 6 408 38 466 0.723 0.862
QNU38870.1 GT4 9 408 1 407 0.6919 0.8648
AF-A0A248VQW5-F1-model_v4 GT2 8 421 5 438 0.6697 0.864
B1FZW0 GT2 9 421 6 591 0.6685 0.8645
AF-A0A345VG16-F1-model_v4 GT2 4 419 267 688 0.6672 0.8482
AF-A0A5B8KBR4-F1-model_v4 GT2 4 415 268 684 0.6551 0.8425
AF-A0A1P8M2V1-F1-model_v4 GT2 5 417 273 691 0.6516 0.8385
A0A836MCF6 GT100 8 421 1 500 0.6474 0.8332
A0A543Z557 GH16_5 1 410 12 436 0.6445 0.8487
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A160T089 GT4 5 409 2 436 0.7709 0.8924
A0A160T2N7 GT28 6 408 38 466 0.723 0.862
QNU38870.1 GT4 9 408 1 407 0.6919 0.8648
B1FZW0 GT2 9 421 6 591 0.6685 0.8645
A0A836MCF6 GT100 8 421 1 500 0.6474 0.8332
A0A543Z557 GH16_5 1 410 12 436 0.6445 0.8487
E4NKE4 GT2 8 420 22 425 0.6373 0.8348
A0A0J6W0G8 GH16_3 2 419 9 433 0.6351 0.8085
A0A9E6Y097 GT4 5 420 418 837 0.6347 0.8586
A0A2U8PPB3 GT4 10 408 1 404 0.6344 0.8929
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6fhz-assembly1.cif.gz_A 15 416 11 440 0.7772 0.8504
7waw-assembly1.cif.gz_A 15 409 1 427 0.7423 0.8676
6nc6-assembly2.cif.gz_B 11 405 1 405 0.7071 0.8042
5y50-assembly1.cif.gz_A 10 411 9 439 0.6988 0.7771
4mlb-assembly1.cif.gz_C 6 414 3 452 0.6808 0.7518
6hfb-assembly3.cif.gz_C 6 414 3 451 0.6788 0.7489
6gwh-assembly1.cif.gz_A 1 414 1 440 0.6786 0.7343
3wbn-assembly1.cif.gz_A 6 414 1 450 0.6756 0.7447
5xjj-assembly1.cif.gz_A 10 411 10 439 0.6708 0.7483
6ids-assembly1.cif.gz_A 11 414 9 437 0.6667 0.7351
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P39855-F1-model_v4 10 408 1 396 0.8569 0.9011
AF-P71399-F1-model_v4 8 410 1 401 0.8259 0.8661
AF-Q45411-F1-model_v4 4 417 5 434 0.8168 0.865
AF-Q05347-F1-model_v4 6 418 2 437 0.8135 0.8652
AF-P0AAA7-F1-model_v4 8 412 1 416 0.8087 0.8563
AF-Q99191-F1-model_v4 7 411 8 432 0.8015 0.8632
AF-P0AAA8-F1-model_v4 8 412 1 416 0.8014 0.8496
AF-P37746-F1-model_v4 9 415 6 415 0.7978 0.8418
AF-P26400-F1-model_v4 6 411 7 430 0.7967 0.8547
AF-Q9CNC5-F1-model_v4 8 412 1 399 0.7934 0.8374
Download Full SwissProt Results