dbCAN Logo

PROTEIN: HRGMv2_3987_91_3

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_3987_91_3.pdb
Genome ID:
HRGMv2_3987
Protein ID:
HRGMv2_3987_91_3

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MDKYLKQAIE   EYERNIEKND   IFYMDASVLM   DIEEYYEKEN   RKYDAERLMR   FAEKLHPQNE 60
EVLIVKAYRL   KNEGKWSEAL   SLINRIENRD   NRDLQAFWAE   WETACGQPGK   AETRLLGNMP 120
DVLGSEDYDS   FIDLAEILLD   YGYTQRALHI   LQQVPDNYTF   RRKADELMSE   AYYQVQDYGK 180
SLEYATRVVD   SDPYDAISWG   QLADLQQKVG   QYENCIASCD   YSLAINPDYQ   PAMNLKLFAT 240
FRLNRIEEGF   NLYKKFIISA   PDDYSIRMYA   AEQMLSSGQY   QDALNIFHDA   LRLCPVDNPD 300
HSRIVYDTSF   TLSYLGKTGE   AEELMLTLCL   LDNPIKDIYF   QLIGIYKETV   QDNASLSVIS 360
KILDLPHSDK   DSLQLAQILT   NNITLSTSLE   VWKKLAKDEI   NDYEFAAIYV   YEAIGFYVFH 420
QKTEFLHAFH   KAAALCPSVL   CEKFQVIFHT   TDVNELLSLA   DETASQW 467
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q2FYH2-F1-model_v4 48 467 1 367 0.6122 0.7047
AF-A0A133CIM0-F1-model_v4 4 449 4 397 0.5988 0.6877
AF-A0A3P7PPM0-F1-model_v4 21 435 1 450 0.5762 0.6535
AF-A0A077ZEJ0-F1-model_v4 7 449 2 390 0.5659 0.6499
AF-Q8DP47-F1-model_v4 26 466 6 384 0.5494 0.647
AF-A0A0K0E476-F1-model_v4 1 411 26 403 0.5332 0.6675
AF-Q86TZ1-F1-model_v4 3 407 150 512 0.5248 0.7063
AF-Q38AS4-F1-model_v4 1 415 25 390 0.523 0.666
AF-Q5CZ52-F1-model_v4 24 447 55 415 0.518 0.6674
AF-Q4E4D8-F1-model_v4 23 449 74 433 0.5161 0.6805
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-D3P881-F1-model_v4 GT0 23 442 12 591 0.5145 0.6639
WAJ27476.1 GT32 2 467 19 1031 0.5092 0.7118
AF-A0A517ZPS3-F1-model_v4 GT41 25 456 9 682 0.5031 0.6501
AF-A0A4D8R2S2-F1-model_v4 GT0 56 456 11 499 0.5017 0.6706
UTP39124.1 GT41 21 467 11 718 0.4972 0.6495
QWE00589.1 GT41 22 467 7 725 0.4884 0.6418
AF-A0A7Z2G7K4-F1-model_v4 GT41 1 456 53 781 0.4866 0.6284
AF-A0A4D8Q2I8-F1-model_v4 GT0 24 453 12 497 0.484 0.6103
A0A2A2W708 GT41 1 459 37 760 0.4801 0.6123
AF-A0A290WVX5-F1-model_v4 GT41 23 458 159 887 0.4741 0.6638
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A2C9D4U5 GT41 2 467 24 806 0.5314 0.692
A0A7H1N5D9 GT41 3 453 14 754 0.5154 0.6657
Q1Q1I3 GT2 8 385 18 513 0.5115 0.693
W6K825 GT41 21 461 1 705 0.5107 0.6562
WAJ27476.1 GT32 2 467 19 1031 0.5092 0.7118
A0A517ZPS3 GT41 25 456 9 682 0.5031 0.6501
WBV45275.1 GT32 7 467 7 487 0.5028 0.6247
A0A248JWL0 GT41 7 467 16 777 0.5028 0.6491
A0A6B8M8G3 GT41 56 466 7 705 0.5026 0.7021
A0A5K7ZII4 GT41 8 467 28 813 0.4998 0.6681
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6eou-assembly1.cif.gz_A 27 449 1 319 0.5914 0.7403
1w3b-assembly1.cif.gz_B 24 450 4 332 0.5737 0.7228
1w3b-assembly1.cif.gz_A 25 447 5 352 0.5705 0.7016
8bbe-assembly1.cif.gz_D 15 446 28 506 0.4904 0.6191
7yeh-assembly1.cif.gz_A 22 467 1 654 0.4387 0.6295
7yea-assembly1.cif.gz_B 7 467 111 900 0.4208 0.5856
7ntf-assembly1.cif.gz_A 8 467 12 795 0.4192 0.5643
8q9t-assembly1.cif.gz_E 3 467 367 913 0.4182 0.5842
8bbg-assembly1.cif.gz_D 2 446 535 1174 0.3972 0.6115
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q57711-F1-model_v4 2 443 1 330 0.5791 0.7003
AF-P54389-F1-model_v4 3 466 8 421 0.5785 0.6394
AF-P42810-F1-model_v4 16 455 78 586 0.5537 0.6648
AF-P19737-F1-model_v4 41 467 32 387 0.5369 0.6502
AF-Q86TZ1-F1-model_v4 3 407 150 512 0.5248 0.7063
AF-Q5CZ52-F1-model_v4 24 447 55 415 0.518 0.6674
AF-A1Z8E9-F1-model_v4 4 384 109 462 0.5067 0.6735
AF-Q0HA38-F1-model_v4 1 467 470 1225 0.5047 0.7466
AF-Q1JQ97-F1-model_v4 24 418 33 360 0.4924 0.7187
AF-Q7K4B6-F1-model_v4 1 441 65 918 0.4907 0.6889
Download Full SwissProt Results