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PROTEIN: HRGMv2_3986_23_16

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_3986_23_16.pdb
Genome ID:
HRGMv2_3986
Protein ID:
HRGMv2_3986_23_16

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKRSPEEMQT   LVREYQKNLS   EASIPFWIDV   PDILDILDHF   EQTQQTIEAE   LCLRIALRMH 60
PDDADILMRK   VYRLKNDGRW   HDAEALAKQL   PDQDHIDVQF   FLAEKALSEV   RFFDADAIYE 120
NILSREQQAI   EEELLENPEQ   TASLDDLRME   IAELFLDYGS   EVFAKKYLLL   IDKNSPLQRR 180
VSLLQGEILM   RYGSPEQAEE   EVERVIDEDP   YNIDAWIFRA   ELANERKDFD   KCSEAAEYAL 240
AIEPNHQKAL   RMKAISALGK   EDWDTVIDTY   DLYHTLEPND   YTMSLSVGEI   YLNRQNIAKG 300
REALQHAIQN   CNNENPDKQR   ITHDLAVSFA   MEGDIRQAYV   CMATLSSLGV   PHDEMIFQTA 360
RIAFNYGFIP   FGIEMMRHRF   SLVPGSDERN   VQVAQLFYEC   KLYKEVQDLW   EYLFKAGFSS 420
ESEAQVYLAY   AAVQLRNKEV   FSTTSAAALR   HQPSLMQQVL   GQLYKDVPLH   EIPTRILTDY 480
FSNTP 485
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A077ZEJ0-F1-model_v4 30 485 1 405 0.6276 0.7044
AF-Q8DP47-F1-model_v4 62 485 14 410 0.583 0.6708
AF-A0A5K4FCS7-F1-model_v4 28 483 13 444 0.5324 0.5896
AF-Q38AS4-F1-model_v4 2 480 25 422 0.5262 0.6339
AF-Q5CZ52-F1-model_v4 29 485 61 461 0.524 0.6271
AF-Q4E4D8-F1-model_v4 29 485 77 478 0.5223 0.6368
AF-A0A0P0VJ70-F1-model_v4 51 485 59 455 0.5175 0.7193
AF-A4IDK2-F1-model_v4 3 484 6 468 0.5174 0.563
AF-A0A096MK92-F1-model_v4 2 484 30 788 0.5125 0.6533
AF-D4A8B1-F1-model_v4 94 485 37 481 0.5115 0.6547
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
QWE00589.1 GT41 27 485 11 707 0.5051 0.6608
AF-B1YQS3-F1-model_v4 GT41 29 485 7 532 0.4952 0.6419
AF-A0A517ZPS3-F1-model_v4 GT41 142 485 1 614 0.4946 0.8009
AF-A0A7Z2G7K4-F1-model_v4 GT41 2 485 11 715 0.492 0.6156
QWD22996.1 GT41 29 483 11 727 0.4916 0.6313
AF-Q46IF6-F1-model_v4 GT41 5 485 24 714 0.4807 0.5943
AF-A0A809PJR2-F1-model_v4 GT41 4 485 10 611 0.4782 0.6007
BEI39593.1 GT41 1 485 9 717 0.4763 0.585
AF-A0A5J6N289-F1-model_v4 GT41 27 483 54 789 0.4754 0.6262
WCM28040.1 GT41 29 485 15 682 0.4742 0.626
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
W6K825 GT41 27 484 2 694 0.5269 0.6658
A0A0P0VJ70 GT41 51 485 59 455 0.5171 0.7183
A0A090AFS5 GT41 28 485 6 506 0.5073 0.6461
QWE00589.1 GT41 27 485 11 707 0.5051 0.6608
A0A2N1J4S8 GT2 26 476 8 535 0.5045 0.6047
A0A2I6S914 GT41 3 485 3 798 0.5015 0.6432
QLH71667.1 GT32 1 477 90 809 0.4938 0.64
A0A3N1M8J8 GT41 1 485 24 799 0.4918 0.6336
QWD22996.1 GT41 29 483 11 727 0.4916 0.6313
A0A518CPB2 GT41 3 472 251 1023 0.4914 0.6895
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6eou-assembly1.cif.gz_A 30 464 8 342 0.6154 0.7494
1w3b-assembly1.cif.gz_B 147 465 1 304 0.5956 0.8183
1w3b-assembly1.cif.gz_A 142 485 1 320 0.5813 0.7812
7ntf-assembly1.cif.gz_A 1 485 77 880 0.4337 0.5702
7y4i-assembly1.cif.gz_B 95 485 129 597 0.3938 0.5966
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P54389-F1-model_v4 1 485 1 387 0.6269 0.7439
AF-Q5CZ52-F1-model_v4 29 485 61 461 0.524 0.6271
AF-Q1JQ97-F1-model_v4 94 485 34 388 0.5143 0.7159
AF-Q61371-F1-model_v4 2 468 29 730 0.5006 0.6563
AF-Q7Z4L5-F1-model_v4 1 485 406 1153 0.4533 0.6634
AF-Q0HA38-F1-model_v4 1 485 410 1152 0.4436 0.6491
AF-Q9M8Y0-F1-model_v4 22 485 15 853 0.4213 0.5876
AF-P56558-F1-model_v4 1 485 121 959 0.4119 0.5627
AF-O15294-F1-model_v4 1 475 165 1038 0.4059 0.5669
AF-Q27HV0-F1-model_v4 1 475 165 1038 0.4049 0.5651
Download Full SwissProt Results