PROTEIN: HRGMv2_3980_27_43
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Protein File & Metadata
Source:
HRGMv2_3980_27_43.pdb
Genome ID:
Protein ID:
HRGMv2_3980_27_43
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Protein Sequence
MIIDYNFRVA GFVLCLHVHQ EIDIDSMLPS FVPFRCDDGK QAEKLLDLTL LPAGESLPDV 60 PVALVEEVSS GMGMMRLYST ADGSMYRLKI GRSTGVFSNE MESSADFSVS RAVVDMDDAN 120 AGQVIGLMLR MAFAQAALLR SAVMIHASAV HVDGRAYLFM GRSGTGKSTH AALWQKAVPH 180 CALLNDDSPI VRIVGGVAVA YGSPWSGKTP CYKDLSFPIG GMVRLRQSSE NRFFKREGVD 240 AFVALYPGCS VISSDRRLYD SLCDTLARLA VLVPVATLDC RPDTDAALLC LHKLNDSRI 299
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q38BN8-F1-model_v4 | 1 | 299 | 31 | 498 | 0.6015 |
0.7646 |
| AF-Q4DTE4-F1-model_v4 | 1 | 296 | 32 | 491 | 0.5987 |
0.7664 |
| AF-Q4E5Y9-F1-model_v4 | 1 | 296 | 32 | 491 | 0.5966 |
0.7636 |
| AF-A0A1X7YFQ8-F1-model_v4 | 53 | 299 | 1 | 237 | 0.5308 |
0.6698 |
| AF-Q9HTZ7-F1-model_v4 | 1 | 299 | 8 | 445 | 0.5187 |
0.6661 |
| AF-Q9PP01-F1-model_v4 | 1 | 299 | 1 | 453 | 0.5153 |
0.6661 |
| AF-A0A7I4KKJ2-F1-model_v4 | 1 | 299 | 47 | 456 | 0.5133 |
0.6685 |
| AF-Q2G1W2-F1-model_v4 | 1 | 299 | 14 | 460 | 0.5126 |
0.665 |
| AF-A0A1C1CYB4-F1-model_v4 | 1 | 299 | 107 | 464 | 0.5009 |
0.6517 |
| AF-Q75JD5-F1-model_v4 | 1 | 299 | 36 | 490 | 0.4957 |
0.656 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WAC25127.1 | GT2 | 1 | 299 | 33 | 360 | 0.5813 |
0.7876 |
| UJB65639.1 | GT2 | 1 | 299 | 27 | 357 | 0.5793 |
0.779 |
| AF-A0A1Z4BWH0-F1-model_v4 | GT2 | 1 | 299 | 33 | 363 | 0.5731 |
0.7766 |
| AF-A0A494TL75-F1-model_v4 | GT2 | 1 | 299 | 27 | 353 | 0.5728 |
0.7678 |
| AF-A0A127EZJ5-F1-model_v4 | GT2 | 1 | 299 | 40 | 366 | 0.571 |
0.7742 |
| AF-A0A2K8U543-F1-model_v4 | GT2 | 1 | 299 | 71 | 397 | 0.5635 |
0.7785 |
| AF-A0A7H8XP94-F1-model_v4 | GT2 | 1 | 299 | 419 | 776 | 0.5011 |
0.7363 |
| AF-A0A7L6BC24-F1-model_v4 | GT2 | 1 | 299 | 418 | 775 | 0.4979 |
0.7306 |
| AF-A0A1C4V1M9-F1-model_v4 | GT2 | 1 | 299 | 436 | 793 | 0.4976 |
0.7348 |
| AF-A0A7D5Y7F2-F1-model_v4 | GT2 | 1 | 299 | 438 | 794 | 0.4961 |
0.7332 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WAC25127.1 | GT2 | 1 | 299 | 33 | 360 | 0.5813 |
0.7876 |
| UJB65639.1 | GT2 | 1 | 299 | 27 | 357 | 0.5793 |
0.779 |
| A0A127EZJ5 | GT2 | 1 | 299 | 40 | 366 | 0.571 |
0.7742 |
| A0A2K8U543 | GT2 | 1 | 299 | 71 | 397 | 0.5635 |
0.7785 |
| A0A806J9U2 | GH36 | 1 | 297 | 30 | 477 | 0.5106 |
0.6758 |
| A0A160SYZ9 | GT2 | 1 | 299 | 221 | 735 | 0.4952 |
0.7138 |
| A0A2U9PBD5 | GT2 | 1 | 297 | 467 | 822 | 0.4924 |
0.7379 |
| QXQ07936.1 | GT2 | 84 | 299 | 1 | 235 | 0.4458 |
0.7359 |
| USE34901.1 | GT1 | 2 | 292 | 1 | 312 | 0.43 |
0.7029 |
| A0A1Y6D201 | GT60 | 5 | 299 | 437 | 715 | 0.3895 |
0.5923 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1yvy-assembly2.cif.gz_B | 1 | 299 | 3 | 449 | 0.5308 |
0.6771 |
| 1yvy-assembly1.cif.gz_A | 1 | 297 | 3 | 452 | 0.5259 |
0.676 |
| 6asn-assembly1.cif.gz_A | 1 | 299 | 3 | 454 | 0.5258 |
0.6804 |
| 1oen-assembly1.cif.gz_A | 1 | 299 | 4 | 456 | 0.523 |
0.6758 |
| 1ylh-assembly1.cif.gz_A | 1 | 299 | 6 | 454 | 0.5204 |
0.6725 |
| 1ygg-assembly1.cif.gz_A | 1 | 299 | 6 | 457 | 0.5201 |
0.6736 |
| 2pc9-assembly1.cif.gz_A | 1 | 299 | 3 | 446 | 0.5165 |
0.6634 |
| 2pc9-assembly4.cif.gz_D | 1 | 299 | 2 | 442 | 0.5162 |
0.6619 |
| 1xkv-assembly1.cif.gz_B | 1 | 297 | 3 | 449 | 0.5143 |
0.6658 |
| 6v2n-assembly1.cif.gz_A | 1 | 299 | 4 | 447 | 0.512 |
0.6591 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9RVP6-F1-model_v4 | 1 | 297 | 13 | 459 | 0.5308 |
0.6625 |
| AF-Q0I0F2-F1-model_v4 | 1 | 299 | 8 | 445 | 0.5268 |
0.6758 |
| AF-A8GYT2-F1-model_v4 | 1 | 299 | 8 | 445 | 0.5262 |
0.6751 |
| AF-B0TMY0-F1-model_v4 | 1 | 299 | 8 | 445 | 0.5262 |
0.6754 |
| AF-B8CH32-F1-model_v4 | 1 | 299 | 8 | 445 | 0.5261 |
0.675 |
| AF-A1S1X0-F1-model_v4 | 1 | 299 | 8 | 445 | 0.5258 |
0.6746 |
| AF-A3QJ41-F1-model_v4 | 1 | 299 | 8 | 445 | 0.5256 |
0.6745 |
| AF-Q3ILP3-F1-model_v4 | 1 | 299 | 7 | 444 | 0.5254 |
0.6742 |
| AF-A1RPC2-F1-model_v4 | 1 | 299 | 8 | 445 | 0.5251 |
0.6736 |
| AF-A3DAB2-F1-model_v4 | 1 | 299 | 8 | 445 | 0.5251 |
0.6737 |