PROTEIN: HRGMv2_3897_13_46
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Protein File & Metadata
Source:
HRGMv2_3897_13_46.pdb
Genome ID:
Protein ID:
HRGMv2_3897_13_46
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Detailed structural information will appear here after analysis...
Protein Sequence
MPFCLFAERK LIYTVDSIGL ISYISIDGKK NIEFRKDEFA GPTLWLNNSR LPIGSLDNAK 60 GIYGQNDSVS YRIEYKIENE MLKIDVTCRN LLKERLKNVQ LSLRLGIDTE MSKYPHWHDV 120 FFPTLMRCEK THFWGYMMTP LGRILTVSSP DAIASYHLHY NNSKHKISFG NGHRIRTVSL 180 DLLNPGSLPA RHPQELSLKP GEIRTWTLYL QEVENLNEVP VSVSRNSMSP IFQADYYTLP 240 VKRKSSVKIF SEYSPKVYVV SPNGDKSALA VKKVAKNIYG VEVSLDIEGL YTLTATNQKG 300 KQTEMKLSAI SDRYSDYIKA ARLASLKYQQ KTNTNAECWY GLFSGFIARE YFPDAEVDAE 360 VEKVFNQINK VTFNLDTHLP LNNPMRIQDT ALKAALWAQY YRATGNISYL RWAADLADFI 420 MTTQLKWEWD TVLRNIETDG AYRSGKTHYT SVIYIAKSIM EVMKEEKVLI AADATGEWEH 480 RYNRHYASVK MAMDELAKNL DNIQTEGEMT FEDGMISCSY TQLSEFALLQ PEGSEVRRYY 540 TEAAEKMANM HRCLSQIIIP DSRMNGGSLR FWEAQYDILT MPNMMNSPHG WSAWRIYGLR 600 NLYLLTGKYD YLRQMINAIG SCIQLINPQT AELNWAFVQD PYLKVQRFVP EDKKPGKGKH 660 VEQVIGEQYM PMISDWYRAD TTKMVSSFGR FDGGCCDNDV HEIFKCLGEI LLTSAYVHQL 720 EDGSLVCHNC NVIKDNDTLI VHPNESCITK VYFHLSTNLF VNVLFGEKRV QSNIIKGWIK 780 R 781
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A175WG55-F1-model_v4 | 1 | 781 | 28 | 881 | 0.7041 |
0.7625 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A2S0KVT5-F1-model_v4 | PL27 | 4 | 729 | 1 | 663 | 0.775 |
0.8465 |
| AF-A0A5P8M7F3-F1-model_v4 | PL27 | 8 | 745 | 1 | 629 | 0.7702 |
0.8606 |
| AF-F5Y9B7-F1-model_v4 | PL27 | 2 | 715 | 1 | 619 | 0.761 |
0.8565 |
| E3QS34 | PL27 | 1 | 779 | 1 | 702 | 0.7604 |
0.8102 |
| AF-A0A0P0M2G6-F1-model_v4 | PL27 | 5 | 716 | 22 | 690 | 0.7598 |
0.839 |
| AF-A0A413RT83-F1-model_v4 | PL27 | 5 | 730 | 22 | 690 | 0.7597 |
0.839 |
| AF-A6L332-F1-model_v4 | PL27 | 5 | 730 | 22 | 690 | 0.7596 |
0.8388 |
| A0A174T7R5 | PL27 | 5 | 730 | 22 | 690 | 0.7593 |
0.8385 |
| AF-A0A6I5ZZU4-F1-model_v4 | PL27 | 1 | 766 | 31 | 717 | 0.7589 |
0.8333 |
| A0A416I060 | PL27 | 3 | 745 | 8 | 651 | 0.7588 |
0.844 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2S0KVT5 | PL27 | 4 | 729 | 1 | 663 | 0.775 |
0.8465 |
| A0A5P8M7F3 | PL27 | 8 | 745 | 1 | 629 | 0.7702 |
0.8606 |
| F5Y9B7 | PL27 | 2 | 715 | 1 | 619 | 0.761 |
0.8565 |
| E3QS34 | PL27 | 1 | 779 | 1 | 702 | 0.7604 |
0.8102 |
| A0A174T7R5 | PL27 | 5 | 730 | 22 | 690 | 0.7593 |
0.8385 |
| A0A6I5ZZU4 | PL27 | 1 | 766 | 31 | 717 | 0.7589 |
0.8333 |
| A0A416I060 | PL27 | 3 | 745 | 8 | 651 | 0.7588 |
0.844 |
| A0A3D9KEZ8 | PL27 | 2 | 715 | 1 | 693 | 0.7566 |
0.8095 |
| A0A516PYA3 | PL27 | 16 | 779 | 1 | 640 | 0.7565 |
0.8388 |
| C7Q3H3 | PL27 | 1 | 744 | 11 | 680 | 0.7543 |
0.8274 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5nok-assembly2.cif.gz_B | 8 | 714 | 1 | 669 | 0.7608 |
0.8282 |
| 5nok-assembly1.cif.gz_A | 9 | 714 | 5 | 668 | 0.755 |
0.827 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.