PROTEIN: HRGMv2_3897_12_32
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Protein File & Metadata
Source:
HRGMv2_3897_12_32.pdb
Genome ID:
Protein ID:
HRGMv2_3897_12_32
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Protein Sequence
MKIKNIVTSI FTLLPIALSA QNSVLKNNGW MCDISPEGHI EQIIFNGKDT IPFFRKQINS 60 GPSFYAVIDG KEHVAEWIPN GRYSFRSSIE GVDCMLTYKS WNGLPAMEIV IRNNGFVSFQ 120 PEKAGIKLGV DTYMDKYPEW FGKFFPTLMR NEKTHFFGYM QSPSGKMLGI VSPQPVASWS 180 VSYNLGYQDP APYWFMGHRI ESLNLDLMNA LPLPNRNPQD LWRLQRGEEK KWTIAFIDVS 240 KPEMFENMIH KAADIPVLRI KQTSYNKGDK AIFEVLSSNG RVSVYDDNGK LIPVNILGQK 300 GDIQTVECTL PEVGLYSIKV EDNGKVSEGI ISAHSSWKWT LEQARKGALK YHQKATSHIE 360 SWYGFHSAFL AARYFPQKDL DTILRSRFDY LFDLLHDTEK MEPKYYASRI QNTSGTIGML 420 VDKYQAYGDI DDLRKASRLA DWLIGKWQRP DGAYVNHNTV YTSVIYVAKS ILELTLAERK 480 LSSNGNEWEK ASKRHYESAK RAIDQLVSSQ GNFETEGEIT FEDGMISCSA LQIGMLALMQ 540 ENESEWSRYT DAMIDILNSH DCLAQLRVPD ARRRGGTMRY WEAQYDVQML PNMFNSPHGW 600 SGWRAYATYY AYLLTGNERW LTETYNAMGA FSNIIDYKTG KLRWAFVVDP YVKVRQACSS 660 DTHVTEDSLS FGNPHPELYK TRDFVIGEEY VDMISDWQTV NTQDNDVHEL FKCMAESMLT 720 NAFVVERGDG SVVGYNCNVV VKDKKLIVSP SESQICNLHC NLKSEYEVVF KGKSRKLNDN 780 FLGWAFGVDV YR 792
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A175WG55-F1-model_v4 | 17 | 792 | 25 | 878 | 0.7033 |
0.7713 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A6I5ZZU4-F1-model_v4 | PL27 | 1 | 788 | 5 | 716 | 0.7568 |
0.8094 |
| AF-A0A2S0KVT5-F1-model_v4 | PL27 | 22 | 736 | 1 | 663 | 0.7561 |
0.8318 |
| AF-A0A5P8M7F3-F1-model_v4 | PL27 | 27 | 752 | 1 | 629 | 0.7553 |
0.8497 |
| AF-F5Y9B7-F1-model_v4 | PL27 | 21 | 791 | 1 | 619 | 0.7484 |
0.8477 |
| E3QS34 | PL27 | 17 | 786 | 1 | 702 | 0.747 |
0.8018 |
| AF-A0A0P0M2G6-F1-model_v4 | PL27 | 24 | 723 | 22 | 690 | 0.7464 |
0.8301 |
| AF-A0A413RT83-F1-model_v4 | PL27 | 24 | 737 | 22 | 690 | 0.7461 |
0.8298 |
| AF-A6L332-F1-model_v4 | PL27 | 24 | 737 | 22 | 690 | 0.7458 |
0.8294 |
| AF-C7Q3H3-F1-model_v4 | PL27 | 17 | 751 | 8 | 680 | 0.7457 |
0.8202 |
| A0A174T7R5 | PL27 | 24 | 737 | 22 | 690 | 0.7456 |
0.8291 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A6I5ZZU4 | PL27 | 1 | 788 | 5 | 716 | 0.7568 |
0.8094 |
| A0A2S0KVT5 | PL27 | 22 | 736 | 1 | 663 | 0.7561 |
0.8318 |
| A0A5P8M7F3 | PL27 | 27 | 752 | 1 | 629 | 0.7553 |
0.8497 |
| F5Y9B7 | PL27 | 21 | 791 | 1 | 619 | 0.7484 |
0.8477 |
| E3QS34 | PL27 | 17 | 786 | 1 | 702 | 0.747 |
0.8018 |
| C7Q3H3 | PL27 | 17 | 751 | 8 | 680 | 0.7457 |
0.8202 |
| A0A174T7R5 | PL27 | 24 | 737 | 22 | 690 | 0.7456 |
0.8291 |
| A0A416I060 | PL27 | 22 | 753 | 7 | 651 | 0.7442 |
0.8323 |
| A0A3D9KEZ8 | PL27 | 20 | 721 | 1 | 693 | 0.744 |
0.8017 |
| A0A2N5IQ61 | PL27 | 18 | 751 | 1 | 705 | 0.7436 |
0.7971 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5nok-assembly2.cif.gz_B | 28 | 721 | 1 | 669 | 0.744 |
0.8158 |
| 5nok-assembly1.cif.gz_A | 28 | 721 | 5 | 668 | 0.738 |
0.8143 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.