PROTEIN: HRGMv2_3897_11_57
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Protein File & Metadata
Source:
HRGMv2_3897_11_57.pdb
Genome ID:
Protein ID:
HRGMv2_3897_11_57
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Protein Sequence
MKRLMSLDIL RGITVCGMIL VNNAGGNYSY APLRHSVWNG LTPCDLVFPF FLFMVGISTY 60 ISLKKFDFVP TGDVVRKIFR RMCLIILIGI AIGWFGHICK GEFFPVDTLR IPGVLQRIGL 120 CYGIVSFMVI YINHKYLPWI TLGLLAVYSV LLVAGNGYAC DETNFLAVID RSVFGEGHLY 180 KKSPIDPEGL AGTVPAVAHT LIGFLCGRVL LAKIPVSRRL GYMIAGAVVM LAVGYVLSLW 240 LPLNKRIWST SYVFVTCGWA SLLLSVLIYI IDVKQMNKGW TFFLVFGMNP LFLYVLSEVV 300 AIVLSQTSVK PLIYSGITSL ITDEYLASLV YSVLFCMLMG WVGFILWKKK IYIKI 355
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q55C73-F1-model_v4 | 1 | 355 | 43 | 426 | 0.8583 |
0.944 |
| AF-K7KGM5-F1-model_v4 | 1 | 355 | 27 | 465 | 0.811 |
0.9286 |
| AF-A0A368UJV1-F1-model_v4 | 1 | 355 | 19 | 455 | 0.8106 |
0.9206 |
| AF-I1NBX1-F1-model_v4 | 1 | 355 | 26 | 464 | 0.8103 |
0.9271 |
| AF-Q94CC1-F1-model_v4 | 1 | 355 | 34 | 472 | 0.8053 |
0.9279 |
| AF-B4FES9-F1-model_v4 | 1 | 355 | 40 | 484 | 0.798 |
0.929 |
| AF-Q5JK28-F1-model_v4 | 1 | 355 | 50 | 488 | 0.7973 |
0.931 |
| AF-K7LGV3-F1-model_v4 | 1 | 355 | 52 | 489 | 0.7956 |
0.9299 |
| AF-Q5WMX9-F1-model_v4 | 1 | 355 | 52 | 491 | 0.7953 |
0.9312 |
| AF-A0A1D6FME0-F1-model_v4 | 1 | 355 | 55 | 513 | 0.7845 |
0.9346 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| CDF60354.1 | GH89 | 1 | 355 | 858 | 1227 | 0.6112 |
0.9524 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| CDF60354.1 | GH89 | 1 | 355 | 858 | 1227 | 0.6112 |
0.9524 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q6CK18-F1-model_v4 | 1 | 355 | 113 | 446 | 0.7161 |
0.8571 |
| AF-B3H6K1-F1-model_v4 | 2 | 355 | 104 | 434 | 0.7106 |
0.8481 |
| AF-Q9UTL4-F1-model_v4 | 1 | 355 | 117 | 459 | 0.7035 |
0.8316 |
| AF-Q754I2-F1-model_v4 | 1 | 355 | 110 | 480 | 0.6963 |
0.8115 |
| AF-Q3UDW8-F1-model_v4 | 1 | 355 | 258 | 656 | 0.6944 |
0.9061 |
| AF-P47026-F1-model_v4 | 1 | 355 | 120 | 490 | 0.6925 |
0.8138 |
| AF-Q2UQH4-F1-model_v4 | 1 | 355 | 129 | 500 | 0.6923 |
0.8197 |
| AF-Q68CP4-F1-model_v4 | 1 | 355 | 265 | 663 | 0.6921 |
0.9063 |
| AF-Q6FLH2-F1-model_v4 | 1 | 355 | 115 | 486 | 0.6918 |
0.8107 |
| AF-Q6CAW6-F1-model_v4 | 1 | 355 | 122 | 478 | 0.6906 |
0.8036 |