PROTEIN: HRGMv2_3896_93_5
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Protein File & Metadata
Source:
HRGMv2_3896_93_5.pdb
Genome ID:
Protein ID:
HRGMv2_3896_93_5
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Protein Sequence
MKQKGKRFRK ATRGRLVAVA SAVVVVALAL LAIRALPATE DDMRRSACMV DGRAQLCLVT 60 DQDTIVLRSD PIHQQGVWIN KHWWWPSCDG RILTVKQGDV PTHHGSWVNP NQLSSQMAEL 120 ADSIGSLLKR KEIEQSELEY YLRSHGVQDE GYTRIAHYAD IQKRETDSLK SAYKRLRSYN 180 SKTKATLMRR YLCNVTWFDE DGERQTTTCQ PTMASMGKIG EPMIVHTNLS SKPWGVYAVR 240 NMPWGATERK RIATVTISEN DSTSPCRTII VTGRYTRGNH HDLPNLFAQD GSPVFTNHGR 300 FIGVISKKEV KD 312
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A2K9HC00-F1-model_v4 | GH25 | 7 | 290 | 3 | 268 | 0.4553 |
0.6854 |
| AF-A0A2D3NDJ4-F1-model_v4 | GH25 | 11 | 291 | 5 | 263 | 0.4413 |
0.6796 |
| AF-A0A1P8JJV0-F1-model_v4 | GH25 | 11 | 291 | 5 | 263 | 0.4396 |
0.6766 |
| AF-A0A0S3UJF6-F1-model_v4 | GH25 | 11 | 291 | 5 | 263 | 0.4392 |
0.6753 |
| AF-A0A0K1NKZ3-F1-model_v4 | GH25 | 14 | 290 | 8 | 267 | 0.4372 |
0.6697 |
| AF-A0A2D3LS21-F1-model_v4 | GH25 | 8 | 292 | 3 | 263 | 0.4364 |
0.6676 |
| AF-A0A2D3L624-F1-model_v4 | GH25 | 11 | 290 | 3 | 265 | 0.4345 |
0.6596 |
| A0A6N3E4Q6 | GH25 | 11 | 312 | 39 | 360 | 0.4343 |
0.6425 |
| AF-A0A1B1IA15-F1-model_v4 | GH25 | 11 | 290 | 5 | 268 | 0.4338 |
0.6571 |
| AF-A0A250KL15-F1-model_v4 | GH25 | 11 | 290 | 5 | 267 | 0.4292 |
0.6505 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2D3NDJ4 | GH25 | 11 | 291 | 5 | 263 | 0.4413 |
0.6796 |
| A0A6N3E4Q6 | GH25 | 11 | 312 | 39 | 360 | 0.4343 |
0.6425 |
| D8DXD7 | GH25 | 27 | 308 | 4 | 248 | 0.4121 |
0.6666 |
| A0A137SZY8 | GH25 | 14 | 290 | 4 | 262 | 0.4031 |
0.6181 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.