PROTEIN: HRGMv2_3896_8_54
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Protein File & Metadata
Source:
HRGMv2_3896_8_54.pdb
Genome ID:
Protein ID:
HRGMv2_3896_8_54
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Protein Sequence
MATAKGLKGA KLDFVCADTV FKHPFVDIDE MRTSPVRHRY IHGGFDDGTR FSFYFPEKKH 60 YKGHFFQYIT PFPDSETSAQ AAIGGDNFIG FSVSHGAYFI ETNGGGRLTF APGEKKREAS 120 IGAYRANAAC AQFSRYVAQK IYGCDRPYGY AFGGSGGAYR TTGAAESTTG VWDGYVPFVL 180 GSPQAIPNVF AVRMHALRVF KDVLPQIVDV LEPGGSGNPY EGLTVEQAQA LQEATRMGFP 240 IRAWYGYKYM DVHGFLVLYS GVVSADPTYF AHDFWNLPGY LGHDAPASLL KARVQKQSLI 300 SSILGQAECE RLGLVEALSE KDRGTADQAW RSMGADMKDK PVGYELADEI PEFGMGGDLI 360 VLSGKAKGQK LQLTKVAGRH VAIASFSDMK TLANLRPGDS VRCDNSDFLA VQTYHRHQVP 420 SSDFYVWNQY RDYEGHPIYP QRPMLLGPLF TRSAAGCLPT GKISGKMILC CSVWDREAFA 480 WQGDWYRNKV REHLGDKADS DFRLWYNDRC THGDIDDSTQ VVGYNGVLQQ ALLDISDWVE 540 KGIEPPLSSN YRVDDGQVVL AADASSRHGI QPVVTATIAG SKRADVKVGE QVDINVVAET 600 PQKAGRIVSA KWSIDGKHYT RRQNLTNATS TNDDSRMEFS TTVAFDRPGT YFVAVDVAAQ 660 RQGDAHTPYT LIHNIDRVRI VVK 683
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0D2E0T2-F1-model_v4 | 1 | 660 | 20 | 521 | 0.5727 |
0.684 |
| AF-A0A175W8T1-F1-model_v4 | 1 | 638 | 2 | 522 | 0.5709 |
0.6672 |
| AF-A0A0D2H3H7-F1-model_v4 | 1 | 638 | 16 | 522 | 0.5686 |
0.6745 |
| AF-A0A175VSR3-F1-model_v4 | 1 | 660 | 9 | 522 | 0.5671 |
0.6637 |
| AF-A0A0D2GGB2-F1-model_v4 | 1 | 638 | 26 | 523 | 0.5655 |
0.6805 |
| AF-A0A0D2GWY5-F1-model_v4 | 1 | 638 | 32 | 533 | 0.5636 |
0.6808 |
| AF-A0A1C1D2I1-F1-model_v4 | 1 | 603 | 16 | 559 | 0.5525 |
0.6436 |
| AF-A0A0H3GL12-F1-model_v4 | 1 | 637 | 35 | 547 | 0.5352 |
0.6594 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3wmt-assembly1.cif.gz_B | 1 | 637 | 1 | 495 | 0.5734 |
0.6752 |
| 3wmt-assembly1.cif.gz_A | 1 | 637 | 1 | 500 | 0.5721 |
0.6709 |
| 8bhh-assembly2.cif.gz_B | 1 | 659 | 1 | 494 | 0.5656 |
0.671 |
| 6fat-assembly2.cif.gz_B | 1 | 660 | 1 | 499 | 0.5651 |
0.6671 |
| 6qga-assembly5.cif.gz_E | 1 | 661 | 2 | 552 | 0.559 |
0.6322 |
| 6qz2-assembly4.cif.gz_D | 1 | 672 | 2 | 556 | 0.5576 |
0.6279 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-D4AS70-F1-model_v4 | 1 | 638 | 25 | 527 | 0.562 |
0.6768 |
| AF-A1DKV3-F1-model_v4 | 1 | 637 | 19 | 522 | 0.5619 |
0.6682 |
| AF-Q8WZI8-F1-model_v4 | 1 | 637 | 20 | 518 | 0.5619 |
0.6715 |
| AF-A2R0Z6-F1-model_v4 | 1 | 637 | 20 | 518 | 0.5618 |
0.6715 |
| AF-B8NPA4-F1-model_v4 | 1 | 637 | 20 | 523 | 0.5614 |
0.6681 |
| AF-A1CTK4-F1-model_v4 | 1 | 637 | 21 | 523 | 0.5605 |
0.6684 |
| AF-B0YDW9-F1-model_v4 | 1 | 637 | 20 | 525 | 0.5603 |
0.6658 |
| AF-B8LV47-F1-model_v4 | 1 | 637 | 23 | 526 | 0.5596 |
0.6685 |
| AF-Q2UP89-F1-model_v4 | 1 | 637 | 33 | 537 | 0.5537 |
0.6665 |
| AF-Q8UK62-F1-model_v4 | 1 | 638 | 33 | 549 | 0.5524 |
0.6584 |