PROTEIN: HRGMv2_3896_37_8
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_3896_37_8.pdb
Genome ID:
Protein ID:
HRGMv2_3896_37_8
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MNRNNILSTL ALAGLVFTPL CAFAQEEAQQ DSVPNTKEVK NRNVMLNASA DNQPRSINIG 60 LPLYVSTTIF EDGTPEAYAE WPCLPFFSWA GGSMFDRFAL KSLSETALTK GSLIYALDTY 120 SRVGAEKFNG TLNYTTNQFG MQKFDGSVAG PIANGWEYAI SVFQDFDRGT YKYGAENYPT 180 QIGIYNVAIS KRFKNNKGQI ALIYKHSDYK SLASLEGPFY FNSDGSVDEY EGFNLGRSNY 240 FPSMDLFTDY DPVTGEQRSN YRHNLLATHD NEYKFRLEYN FKPTLHLNFY SKFRNVNTWN 300 TAMNLAGIST VTEDAGYRYT DGSAFSGNVQ NRFLMNYDGF EKAWMNTAEL KGNTKRHSWR 360 VGLNVWYEYQ GNAMSSGIYT HTVSADPVWL LQPGQTVEDF AKYGAMPNQY TINTGAYFLN 420 SHEMTNAIYA SDDWQVNKKL WLSAGVRIED YNLRAKTAIG DKAHASGWYY NDGTSQTFIK 480 RNYVNTFGVF DGRYTIAQGF GITGSYQFGR THAIAYNYTN ATMPDETPAV EHIATVGIFF 540 NRPWIQLISQ VNYVTAKNNK DNQQFTNPTT GETVNIPVDF AVSTWGWTTD FVLTPFKGFN 600 FHGLLTLQAP KYGDYNVVAN FQDGTSTSIN FDGNTVTSMS KVLIELDPSY SFNKFRIWAS 660 FRYFSKQYIN KTNSLFFKAH WESFGGLDYQ VNQHFGLGVN LVNIFNVKGA NGSINSADLL 720 EKQSDMSAFD HYLTSGSCIR PFTVELAARL NF 752
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P0CL48-F1-model_v4 | 20 | 752 | 45 | 702 | 0.7604 |
0.8465 |
| AF-A0A0H3GUM0-F1-model_v4 | 19 | 752 | 42 | 706 | 0.7602 |
0.8409 |
| AF-Q9I683-F1-model_v4 | 18 | 752 | 40 | 730 | 0.7558 |
0.819 |
| AF-Q9HZT6-F1-model_v4 | 18 | 752 | 47 | 718 | 0.7557 |
0.8338 |
| AF-A0A0H3GNH3-F1-model_v4 | 19 | 752 | 31 | 709 | 0.7495 |
0.8147 |
| AF-Q9HUX3-F1-model_v4 | 18 | 752 | 43 | 708 | 0.7487 |
0.8281 |
| AF-A0A0H3H0D6-F1-model_v4 | 22 | 752 | 27 | 672 | 0.7486 |
0.8315 |
| AF-A0A0H3GPE7-F1-model_v4 | 19 | 752 | 28 | 690 | 0.7474 |
0.821 |
| AF-Q8ZRQ2-F1-model_v4 | 1 | 752 | 1 | 729 | 0.7439 |
0.7669 |
| AF-Q9I422-F1-model_v4 | 20 | 752 | 51 | 732 | 0.7422 |
0.8164 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2U8E3N6 | PL0 | 1 | 748 | 1977 | 3664 | 0.3507 |
0.585 |
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6z8a-assembly1.cif.gz_A | 19 | 752 | 9 | 677 | 0.7797 |
0.8402 |
| 8a60-assembly1.cif.gz_A | 29 | 752 | 5 | 677 | 0.7728 |
0.8285 |
| 8b14-assembly1.cif.gz_A | 18 | 752 | 3 | 696 | 0.7685 |
0.8114 |
| 4cu4-assembly1.cif.gz_A | 18 | 752 | 1 | 693 | 0.7666 |
0.8089 |
| 3qlb-assembly2.cif.gz_B | 18 | 752 | 5 | 670 | 0.7622 |
0.8215 |
| 2fcp-assembly1.cif.gz_A | 19 | 752 | 2 | 705 | 0.7615 |
0.7983 |
| 4epa-assembly1.cif.gz_A | 29 | 752 | 8 | 631 | 0.7608 |
0.8458 |
| 5fp1-assembly1.cif.gz_A | 18 | 752 | 1 | 701 | 0.7599 |
0.7982 |
| 1by5-assembly1.cif.gz_A | 19 | 752 | 6 | 697 | 0.7585 |
0.8042 |
| 3qlb-assembly1.cif.gz_A | 18 | 752 | 5 | 673 | 0.7579 |
0.8155 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q01674-F1-model_v4 | 1 | 752 | 2 | 710 | 0.7675 |
0.8015 |
| AF-E1W8M5-F1-model_v4 | 26 | 752 | 40 | 702 | 0.7646 |
0.845 |
| AF-P0CL48-F1-model_v4 | 20 | 752 | 45 | 702 | 0.7604 |
0.8465 |
| AF-Q47162-F1-model_v4 | 1 | 752 | 19 | 735 | 0.7526 |
0.7912 |
| AF-A1JTG3-F1-model_v4 | 21 | 752 | 24 | 672 | 0.7509 |
0.8303 |
| AF-P0C2M9-F1-model_v4 | 21 | 752 | 25 | 672 | 0.7503 |
0.8309 |
| AF-A0A0H2ZI93-F1-model_v4 | 18 | 752 | 43 | 708 | 0.7492 |
0.8287 |
| AF-Q9HUX3-F1-model_v4 | 18 | 752 | 43 | 708 | 0.7487 |
0.8281 |
| AF-P46359-F1-model_v4 | 24 | 752 | 21 | 672 | 0.7478 |
0.8232 |
| AF-P06971-F1-model_v4 | 1 | 752 | 1 | 747 | 0.7407 |
0.7552 |