PROTEIN: HRGMv2_3894_21_30
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Protein File & Metadata
Source:
HRGMv2_3894_21_30.pdb
Genome ID:
Protein ID:
HRGMv2_3894_21_30
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Protein Sequence
MKTFYFRSML AICFAVLSGV YGYAQKKATD YSLSPYFSPG TTQVMSPDQD GFIRRWLLLD 60 PIDKPNRSNT VFTDSYLREV LTAKYYSEQF TKLPKDGEKV KVGKQKLTWH ALESNMFNVK 120 LFRFASRRDK QVYGVLFLAA TVIECPEDLS GVRMSVGSNS ASMWWLNGEE AVLLSGDRRM 180 VVDDCLSRRL TLKKGKNVIW GAVINGPGMS DFCLRFLDEN GNPIKNITVS YK 232
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q92344-F1-model_v4 | 42 | 232 | 168 | 362 | 0.45 |
0.6787 |
| AF-Q6L8S8-F1-model_v4 | 41 | 232 | 116 | 283 | 0.3276 |
0.7163 |
| AF-E7FE27-F1-model_v4 | 41 | 232 | 118 | 285 | 0.3169 |
0.7142 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UPS44903.1 | CBM6 , GH43_2 | 28 | 232 | 447 | 701 | 0.5647 |
0.9652 |
| AF-D5EXY9-F1-model_v4 | CBM6 , GH43_2 | 28 | 232 | 446 | 700 | 0.5591 |
0.9542 |
| AF-D7SFH3-F1-model_v4 | GH43_2 | 31 | 232 | 483 | 697 | 0.5547 |
0.959 |
| AF-A0A7G9XVI1-F1-model_v4 | GH43_2 , GH8 | 2 | 232 | 1 | 1048 | 0.51 |
0.8433 |
| AF-A0A068NPW6-F1-model_v4 | GH0 | 40 | 232 | 21 | 214 | 0.462 |
0.8513 |
| AF-A0A2S0KVC0-F1-model_v4 | GH0 | 6 | 232 | 39 | 277 | 0.4297 |
0.7458 |
| A0A380YJ87 | GH20 | 12 | 232 | 208 | 837 | 0.4292 |
0.7104 |
| AF-A0A344TID5-F1-model_v4 | GH163 | 16 | 222 | 11 | 202 | 0.4286 |
0.8102 |
| AF-A0A415S3H1-F1-model_v4 | GH20 | 16 | 232 | 254 | 837 | 0.4274 |
0.7188 |
| AF-A0A402CZV5-F1-model_v4 | GH4 | 47 | 221 | 458 | 622 | 0.4244 |
0.859 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UPS44903.1 | CBM6 , GH43_2 | 28 | 232 | 447 | 701 | 0.5647 |
0.9652 |
| D7SFH3 | GH43_2 | 31 | 232 | 483 | 697 | 0.5547 |
0.959 |
| A0A7G9XVI1 | GH43_2 , GH8 | 2 | 232 | 1 | 1048 | 0.51 |
0.8433 |
| A0A380YJ87 | GH20 | 12 | 232 | 208 | 837 | 0.4292 |
0.7104 |
| A0A344TID5 | GH163 | 16 | 222 | 11 | 202 | 0.4286 |
0.8102 |
| A0A402CZV5 | GH4 | 47 | 221 | 458 | 622 | 0.4244 |
0.859 |
| A0A1U9NQX6 | CBM51 , GH20 | 10 | 232 | 57 | 853 | 0.4213 |
0.6958 |
| A0A518LMX6 | GH31 | 43 | 232 | 945 | 1147 | 0.3988 |
0.8107 |
| BCM93550.1 | GH2 | 40 | 232 | 948 | 1134 | 0.3981 |
0.8178 |
| A0A1H1SHM5 | GH2 | 41 | 232 | 945 | 1131 | 0.396 |
0.8112 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4ai0-assembly1.cif.gz_A | 42 | 232 | 22 | 241 | 0.4964 |
0.6427 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q92344-F1-model_v4 | 42 | 232 | 168 | 362 | 0.45 |
0.6787 |
| AF-Q6L8S8-F1-model_v4 | 41 | 232 | 116 | 283 | 0.3276 |
0.7163 |