PROTEIN: HRGMv2_3879_9_48
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_3879_9_48.pdb
Genome ID:
Protein ID:
HRGMv2_3879_9_48
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MFMKKALLMI ALMLGSVVAF AQKPDKNEVK QLQNFLSQPA EKGGTNAQAL KITDLSAPST 60 WEGVTVENGK VTAIQWKDKH LAGTLNLSGF SALTKVDVSR NALTDLNVSN NPALIEVNAS 120 RNKLATMEIE NDGALAKLAV YRNRLTDLNI SGTPFLSDLN CSNNLFVELN LANAANLKTL 180 NCQGCHIEEL NIQGCAALKN LYCGYNKLAS INLFGVENLT NFNIDDNEIS ELIISGLPSL 240 STFICSDNRM KTLALRNCNA LIDVVCSYND LTSFTLDNCP NLQYVDCSYN DLTSLTLSNM 300 TFLQRLICNN NQLTMLDVSF DQALTYINCR YNYITDFRTI GCSSLRMVAC QWNY 354
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9VT44-F1-model_v4 | 46 | 354 | 63 | 428 | 0.6361 |
0.8879 |
| AF-A0A044VDX9-F1-model_v4 | 12 | 354 | 12 | 402 | 0.609 |
0.7839 |
| AF-A0A3P7E5J7-F1-model_v4 | 12 | 354 | 20 | 557 | 0.5575 |
0.7788 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4u08-assembly2.cif.gz_B | 20 | 354 | 14 | 371 | 0.7425 |
0.8347 |
| 4li2-assembly1.cif.gz_A | 48 | 354 | 65 | 418 | 0.6947 |
0.8773 |
| 3bz5-assembly1.cif.gz_A | 21 | 354 | 2 | 329 | 0.6561 |
0.8017 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P17778-F1-model_v4 | 22 | 354 | 33 | 349 | 0.7066 |
0.8555 |
| AF-O08770-F1-model_v4 | 10 | 354 | 4 | 375 | 0.6395 |
0.8135 |
| AF-Q5R6B1-F1-model_v4 | 8 | 354 | 18 | 360 | 0.6106 |
0.7576 |
| AF-Q4R6F0-F1-model_v4 | 49 | 354 | 250 | 594 | 0.5183 |
0.8439 |