PROTEIN: HRGMv2_3879_4_31
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Protein File & Metadata
Source:
HRGMv2_3879_4_31.pdb
Genome ID:
Protein ID:
HRGMv2_3879_4_31
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Protein Sequence
MKALRITAVY ILTSILSLCL GAKASAQTAS GLPVEDYSID SSRVHNMYVG IRNMNFIKDN 60 EFSGSVMKGY TLPGLWLQPS VKFYPLRNVK LEAGFHALIY DGAIKYPNFA YQDIAVWKGA 120 QYQRGAHLLP MFRAHVRLSN VHLVWGTLYS GSTHGLMTPL YDPELDFSAD PDLGFQVLVD 180 TRSLHLDAWI NWQSFVFRMS DHQEAFTVGL SMRAWLNPGN KKLRWYVPVQ LLAQHRGGEI 240 IETEQRQVRT LMNGAVGVGM EWNVGRGLLR SFGAEAAALG YYQQSGTLWP FDSGVAAYVT 300 ASAQLGKYFN ARLGYFHGRK FISMYGLPYF GCVSMKNEGA TYDGMTTVFG SVEYRRRVAD 360 GFTVGVWGDI YEVHPGKMTS PDGTVSGAGS ATNFAFGAYF KVDFDFHVWN SRK 413
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O25287-F1-model_v4 | 43 | 407 | 24 | 410 | 0.6874 |
0.7887 |
| AF-O25734-F1-model_v4 | 43 | 407 | 23 | 427 | 0.678 |
0.795 |
| AF-P43839-F1-model_v4 | 34 | 402 | 16 | 359 | 0.6217 |
0.7105 |
| AF-Q9I6X0-F1-model_v4 | 22 | 407 | 2 | 444 | 0.5989 |
0.6799 |
| AF-P02932-F1-model_v4 | 28 | 402 | 13 | 351 | 0.5961 |
0.6867 |
| AF-A0A0H3GIV3-F1-model_v4 | 27 | 402 | 12 | 350 | 0.5932 |
0.682 |
| AF-Q47706-F1-model_v4 | 29 | 406 | 19 | 421 | 0.5931 |
0.6701 |
| AF-Q9I0X7-F1-model_v4 | 22 | 407 | 11 | 448 | 0.593 |
0.6762 |
| AF-Q32E50-F1-model_v4 | 30 | 402 | 15 | 362 | 0.5926 |
0.6758 |
| AF-P02931-F1-model_v4 | 30 | 402 | 15 | 362 | 0.5918 |
0.6751 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0E1SCH0 | GH8 | 2 | 406 | 63 | 1990 | 0.3271 |
0.5554 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0E1SCH0 | GH8 | 2 | 406 | 63 | 1990 | 0.3271 |
0.5554 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6ehe-assembly1.cif.gz_A | 43 | 402 | 1 | 302 | 0.6453 |
0.7602 |
| 8bym-assembly1.cif.gz_A | 46 | 402 | 15 | 321 | 0.6238 |
0.7478 |
| 6ehb-assembly1.cif.gz_C | 27 | 402 | 1 | 320 | 0.6214 |
0.7173 |
| 6ehb-assembly1.cif.gz_B | 27 | 402 | 1 | 317 | 0.6201 |
0.7188 |
| 6ehd-assembly1.cif.gz_A | 33 | 402 | 1 | 322 | 0.6116 |
0.702 |
| 1pho-assembly1.cif.gz_A | 35 | 402 | 1 | 330 | 0.6048 |
0.6933 |
| 1e54-assembly1.cif.gz_A | 43 | 402 | 1 | 332 | 0.6031 |
0.6874 |
| 6ene-assembly1.cif.gz_C | 35 | 402 | 1 | 329 | 0.603 |
0.6914 |
| 7fdy-assembly1.cif.gz_C | 35 | 402 | 1 | 337 | 0.6026 |
0.6835 |
| 7fdy-assembly1.cif.gz_A | 35 | 402 | 1 | 338 | 0.6015 |
0.6823 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q52581-F1-model_v4 | 23 | 402 | 2 | 341 | 0.629 |
0.7096 |
| AF-P43839-F1-model_v4 | 34 | 402 | 16 | 359 | 0.6217 |
0.7105 |
| AF-Q8DBX0-F1-model_v4 | 23 | 402 | 5 | 340 | 0.6194 |
0.706 |
| AF-O54340-F1-model_v4 | 34 | 402 | 16 | 343 | 0.6181 |
0.7211 |
| AF-P29739-F1-model_v4 | 32 | 402 | 14 | 326 | 0.6168 |
0.7321 |
| AF-Q48217-F1-model_v4 | 35 | 403 | 17 | 361 | 0.6167 |
0.7061 |
| AF-P20149-F1-model_v4 | 35 | 403 | 17 | 361 | 0.6154 |
0.7043 |
| AF-Q48216-F1-model_v4 | 35 | 403 | 17 | 360 | 0.6147 |
0.7046 |
| AF-P46027-F1-model_v4 | 35 | 403 | 17 | 371 | 0.6139 |
0.6932 |
| AF-Q9KK91-F1-model_v4 | 21 | 402 | 6 | 366 | 0.6119 |
0.6769 |